FC876292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 3 Query: 453 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 T +++ +RG+R+RPWG++AAEIRDP K RVWLGTF+T RG KAK NFP Sbjct: 25 TTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 35/72 (48.61%), Postives = 42/72 (58.33%), Query Frame = 3 Query: 432 VEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 V+ A T +YRG+R+RPWG++AAEIRDP K RVWLGTF+T RG KAK NFP Sbjct: 5 VKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 390 SAGRKSHGSTAVKHVEQAKKSTERKRKN----QYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 S+ + + S++ +Q+ K ER + YRG+R+RPWGK+AAEIRDP KG R+WLGTF + +RG+KA +NFP Sbjct: 77 SSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFP 167
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 447 KSTERKRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 K+ + + + YRG+R+RPWGK+AAEIRDP KG R+WLGT++T +RG+KA +NFP Sbjct: 78 KTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFP 145
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 3 Query: 474 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 +YRG+R+RPWG++AAEIRDP K RVWLGTF+T RG KAK NFP Sbjct: 24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 44/103 (42.72%), Postives = 53/103 (51.46%), Query Frame = 3 Query: 378 LFTFSAGRKSHGSTAVKHVEQAKKS---TERKRK-NQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 671 LF F A + E+ KK+ TE K YRG+RQRPWGK+AAEIRDP K G RVWLGTF T +RG +A +NFP + P Sbjct: 80 LFDFPAVKVEPTENFTAMEEKPKKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEP 182
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 3 Query: 453 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 T ++ YRG+R+RPWG++AAEIRDP K RVWLGTF+T RG KAK NFP Sbjct: 19 TNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = 3 Query: 405 SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 SHGS KK + K K YRG R R WGKW +EIR+P K R+WLGTF T I+G A +NFP+ Sbjct: 4 SHGSDT--ECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPE 83
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 399 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 R+ + A V + ++ ++RG+R+RPWG++AAEIRDP K RVWLGTF++ +RG KAK NFP Sbjct: 2 RRGRAAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFP 84
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 3 Query: 438 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPRAQ*KATLR 698 +A + + KR+ ++GIR R WGKW AEIR+P K R+WLG+++T +RG A +NFP+ P + AT+R Sbjct: 8 KADVAVKMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELLPCTSAEDMSAATIR 94 The following BLAST results are available for this feature:
BLAST of FC876292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876292 ID=FC876292; Name=FC876292; organism=Citrus clementina; type=EST; length=709bpback to top |