FC876292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 3 Query: 462 KRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 K KN YRG+RQR WGKW AEIR P R+WLGTF T +RG AK+NFP+ Sbjct: 66 KTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPN 128
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 414 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 ST+V A + + K ++ YRG+RQRPWGK+AAEIRDP K G RVWLGT+ + +RG KA +NFP Sbjct: 87 STSVSPPTVAPAALQPKGRH-YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFP 164
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 40/93 (43.01%), Postives = 49/93 (52.69%), Query Frame = 3 Query: 390 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNF---PDETP 659 +A RK V + ST K K +YRG+RQRPWGK+AAEIRDP+ R+WLGTF T ++G KA NF P TP Sbjct: 77 TAARKGKHKEEESVVVEDDVSTSVKPK-KYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTP 168
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 474 QYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 653 +YRG+R+RPWGK+AAEIRD + G RVWLGTFNT +RG++A +NFP E Sbjct: 13 KYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 34/78 (43.59%), Postives = 43/78 (55.13%), Query Frame = 3 Query: 417 TAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 T++K ++ A K + YRG+RQR WGKW AEIR P R+WLGTF T IRG A++NFPD Sbjct: 96 TSMKKIDVATKPVKL-----YRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPD 168
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 3 Query: 444 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 653 K + RK + YRG+R+RPWGK+AAEIRD T+ G+RVWLGTF + +RG A +NF E Sbjct: 71 KSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 141 The following BLAST results are available for this feature:
BLAST of FC876292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876292 ID=FC876292; Name=FC876292; organism=Citrus clementina; type=EST; length=709bpback to top |