FC876294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_MYCPA (Carbamoyl-phosphate synthase small chain OS=Mycobacterium paratuberculosis GN=carA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 49/125 (39.20%), Postives = 71/125 (56.80%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESR--QCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSL-IGVLSTEESKSDQELLEMSR-SWDIVGIDLISDVSGQEPF 363 SY Q V+ T P IGNTG N +D ESR + ++AG +R S SNWR +L + L + I+GI+ +DTRA+ R LR GS+ GV S + EL++ R ++G DL +VS + + Sbjct: 47 SYHRQIVVATAPQIGNTGWNGEDAESRGDKIWVAGYAVRDPSPRVSNWRATGSLEDELIRQRIVGIARIDTRAVVRHLRTRGSMKAGVFSGDALADPDELVQRVRGQQSMLGADLAGEVSTPDAY 171
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_BUCBP (Carbamoyl-phosphate synthase small chain OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=carA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWD--IVGIDLISDVS 348 SY+ Q + T PHIGN G+N +D ES GL++R +S SN R +L NYL + I+ IS++DTR +TR LR GS G ++T++ S +L+ D I DL+ VS Sbjct: 57 SYSNQIITFTYPHIGNVGINKNDCESNVIHAKGLIVRDISSIYSNHRSQMSLLNYLLNQKIIVISNIDTRKLTRILRTTGSQYGYITTKKIHSIINVLKHINILDNPITNKDLVKQVS 174
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_BACHK (Carbamoyl-phosphate synthase small chain OS=Bacillus thuringiensis subsp. konkukian GN=carA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGQEPF 363 SY GQ V T P IGN G+N DD ES + GL++ + SN+R +L +YL ERNI G++ +DTR +TR++RQ G+L G L ++ + + ++ + V D + VS ++P+ Sbjct: 45 SYCGQIVTFTYPLIGNYGINRDDFESIHPSVNGLIVNEICDHPSNFRNEISLNDYLKERNIPGLAGIDTRKLTRKIRQYGTLRGRLCNMDADVEYIVSQLKAT---VFTDHVKRVSTKDPY 162
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_BACCR (Carbamoyl-phosphate synthase small chain OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=carA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGQEPF 363 SY GQ V T P IGN G+N DD ES + GL++ + SN+R +L +YL ERNI G++ +DTR +TR++RQ G+L G L ++ + + ++ + V D + VS ++P+ Sbjct: 45 SYCGQIVTFTYPLIGNYGINRDDFESIHPSVNGLIVNEICNHPSNFRNEISLNDYLKERNIPGLAGIDTRKLTRKIRQYGTLRGRLCNMDADVEYIVSQLKAT---VFTDHVKRVSTKDPY 162
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_BACC1 (Carbamoyl-phosphate synthase small chain OS=Bacillus cereus (strain ATCC 10987) GN=carA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGQEPF 363 SY GQ V T P IGN G+N DD ES + GL++ + SN+R +L +YL ERNI G++ +DTR +TR++RQ G+L G L ++ + + ++ + V D + VS ++P+ Sbjct: 45 SYCGQIVTFTYPLIGNYGINRDDFESIHPSVNGLIVNEICDHPSNFRNEISLNDYLKERNIPGLAGIDTRKLTRKIRQYGTLRGRLCNMDADVEYIVSQLKAT---VFTDHVKRVSTKDPY 162
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_BACAN (Carbamoyl-phosphate synthase small chain OS=Bacillus anthracis GN=carA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGQEPF 363 SY GQ V T P IGN G+N DD ES + GL++ + SN+R +L +YL ERNI G++ +DTR +TR++RQ G+L G L ++ + + ++ + V D + VS ++P+ Sbjct: 45 SYCGQIVTFTYPLIGNYGINRDDFESIHPSVNGLIVNEICDHPSNFRNEISLNDYLKERNIPGLAGIDTRKLTRKIRQYGTLRGRLCNMDADVEYIVSQLKAT---VFTDHVKRVSTKDPY 162
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_SYMTH (Carbamoyl-phosphate synthase small chain OS=Symbiobacterium thermophilum GN=carA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.884e-14 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLST 264 SY GQ V+MT P IGN GV D ESRQ ++ GLV++ L S+W+ +L +YLA + ++ +DTRA+TR LR G++ GV++T Sbjct: 39 SYYGQIVVMTYPLIGNYGVTAADGESRQPWIRGLVVKELCDRPSHWQAVGSLSDYLAGCGVPILAGLDTRALTRHLRSHGTMRGVIAT 126
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_STAEQ (Carbamoyl-phosphate synthase small chain OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=carA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.460e-14 Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGQEPF 363 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL LA+ +I GIS VDTR+ITR++R G L T+ + QEL+E ++ ++ D + VS + P+ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLTPKLNGVVVKEASTHPSNFRHQKTLHETLAQYHIPGISGVDTRSITRKIRNHGVLRAGF-TDNKDNIQELVEQLKTAELPR-DEVQTVSTKTPY 165
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_THET8 (Carbamoyl-phosphate synthase small chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=carA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.213e-14 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLS------TEESKSDQELLEMSR----SW-DIVGIDLISDVSGQEPF 363 SY GQ V+MT PH GN GVN D +S + ++ G V + S SN R +T+G ++ ++GI +DTRA+ R++R+ G L G ++ + QE LE R +W DI G D+ +VS P+ Sbjct: 50 SYHGQIVVMTYPHQGNYGVNVYDMQSNRPWVRGFVAKEFSRVASNPRAQQTIGEFMEFYGVVGIEGIDTRALVRKIREGGVLKGTIAHASLFGAPDHAFTQEELEALRREAQAWTDIDGRDMTPEVSTPLPY 181
BLAST of FC876294 vs. ExPASy Swiss-Prot
Match: CARA_THET2 (Carbamoyl-phosphate synthase small chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=carA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.213e-14 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLS------TEESKSDQELLEMSR----SW-DIVGIDLISDVSGQEPF 363 SY GQ V+MT PH GN GVN D +S + ++ G V + S SN R +T+G ++ ++GI +DTRA+ R++R+ G L G ++ + QE LE R +W DI G D+ +VS P+ Sbjct: 50 SYHGQIVVMTYPHQGNYGVNVYDMQSNRPWVRGFVAKEFSRVASNPRAQQTIGEFMEFYGVVGIEGIDTRALVRKIREGGVLKGTIAHASLFGAPDHAFTQEELEALRREAQAWTDIDGRDMTPEVSTPLPY 181 The following BLAST results are available for this feature:
BLAST of FC876294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876294 ID=FC876294; Name=FC876294; organism=Citrus clementina; type=EST; length=420bpback to top |