FC876299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 8.050e-38 Identity = 83/131 (63.36%), Postives = 89/131 (67.94%), Query Frame = 3 Query: 144 VVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 V E G + KDY DPPP PL EL WSFYRA+IAEFIA IG+K+QT P C GVG+L IAW FGGMIFVLVYCT GISGGHINPAVT GLFL RKVS+ RAV YMVA CL AI Sbjct: 5 VSEEGRHG-KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGP------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAI 128
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 80/137 (58.39%), Postives = 93/137 (67.88%), Query Frame = 3 Query: 126 MAKDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 ++++ V +HG KDY DPPP P F EL WSF+RA IAEFIA IGYK +TDP CA VG+L IAW FGGMIFVLVYCT GISGGHINPAVT GLFL RKVS++RA++YM+A C AI Sbjct: 6 ISEEGQVHQHG----KDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAI 132
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 2.863e-35 Identity = 77/132 (58.33%), Postives = 89/132 (67.42%), Query Frame = 3 Query: 147 VEHGSYSAK-DYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAIS 539 VE G+ +AK Y DPPP PL EL KWS YRALIAEF+A IGYK+Q VD C GVG L +AW FG IFVLVYCT G+SGGHINPAVT+GLF RK+S+VR V+Y+VA CL AI+ Sbjct: 12 VEGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQR---ATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIA 140
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.399e-34 Identity = 74/122 (60.66%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 KDY +PPP PLF AEELT WSFYRA IAEF+A +G +K+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ YMV CL AI Sbjct: 31 KDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAI 146
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.018e-32 Identity = 74/122 (60.66%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 KDY +PPP PLF EL+ WSFYRA IAEFIA +G K A N+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RAV YM+ CL AI Sbjct: 30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAI 145
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.737e-32 Identity = 73/139 (52.52%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 120 FPMAKDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 FP + G+ KDY +PPP PLF ELT WSFYRA IAEFIA +G ++ C VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ YMV L AI Sbjct: 15 FPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSK------CKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAI 147
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.737e-32 Identity = 71/139 (51.08%), Postives = 84/139 (60.43%), Query Frame = 3 Query: 120 FPMAKDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 F + G G+ KDY +PPP PLF EL WSFYRA IAEF+A +G +K+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ Y++ CL A+ Sbjct: 15 FSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAV 147
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.737e-32 Identity = 72/132 (54.55%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 141 GVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 G G+ KDY +PPP PLF EL WSFYRA IAEF+A +G +K+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ Y+V CL AI Sbjct: 22 GTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAI 147
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 2.963e-32 Identity = 71/122 (58.20%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 KDY +PP P+F EELT WSFYRA IAEF+A +G K+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RAV YM CL AI Sbjct: 31 KDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVN------KSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAI 146
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 3.869e-32 Identity = 75/139 (53.96%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 120 FPMAKDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 F + G GS KDY +PPP PLF EL WSFYRA IAEF+A +G + T CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ YMV CL AI Sbjct: 15 FSERQPIGTAAQGS-DDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAI 146 The following BLAST results are available for this feature:
BLAST of FC876299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876299 ID=FC876299; Name=FC876299; organism=Citrus clementina; type=EST; length=539bpback to top |