FC876299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.054e-32 Identity = 75/139 (53.96%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 120 FPMAKDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 FP + G + S KDY +PPP PLF EL WSF+RA IAEFIA +G K ++ + CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RAV Y+V CL AI Sbjct: 15 FPERQPIGT---SAQSDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAI 144
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.600e-32 Identity = 71/135 (52.59%), Postives = 86/135 (63.70%), Query Frame = 3 Query: 132 KDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 ++T + + + KDY +PPP PLF EL+ WSFYRA IAEF+A +G K ++ C+ VGI +AW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RAV YMV CL AI Sbjct: 17 RETQPLGTAAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLK------RSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAI 145
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.600e-32 Identity = 73/122 (59.84%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 KDY +PPP P F EL+ WSFYRA IAEFIA +G K A N+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RAV Y+V CL AI Sbjct: 29 KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAI 144
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 8.620e-32 Identity = 69/122 (56.56%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 KDY +PPP PLF EL WSFYRA IAEF+A +G +K+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ Y++ CL AI Sbjct: 35 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAI 150
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 1.920e-31 Identity = 72/123 (58.54%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 168 AKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 +KDY +PPP P F EL WSFYRA IAEFIA +G K A N+ CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ Y+V CL AI Sbjct: 29 SKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAI 145
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.508e-31 Identity = 73/139 (52.52%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 120 FPMAKDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 FP + G + S KDY +PPP P F EL+ WSF+RA IAEFIA +G K ++ + CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ Y+V CL AI Sbjct: 15 FPERQPIGT---SAQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAI 144
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.508e-31 Identity = 73/139 (52.52%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 120 FPMAKDTGVVEHGSYSAKDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 FP + G + S KDY +PPP P F EL+ WSF+RA IAEFIA +G K ++ + CA VGI IAW FGGMIF LVYCT GISGGHINPAVT GLFL RK+S+ RA+ Y+V CL AI Sbjct: 15 FPERQPIGT---SAQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAI 144
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.773e-30 Identity = 66/122 (54.10%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 +DY++PP PLF A EL+ WSFYRA IAEF+A +G +K+ C VGI IAW FGGMIF LVYCT G+SGGHINPAVT GL L RK+S+ RAV Y+V CL A+ Sbjct: 37 RDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGV------SKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAV 152
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.830e-29 Identity = 65/122 (53.28%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 KDY DPPP PL EL KWS YRA IAEF A IG K Q+ G G G+L IAW FGG+IFVLVYCT GISGGH+NPAVT + L R+VS+ RA +Y +A C+ A+ Sbjct: 12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQS-------GEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAV 126
BLAST of FC876299 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.522e-28 Identity = 67/122 (54.92%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 171 KDYTDPPPEPLFHAEELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILCIAWGFGGMIFVLVYCTDGISGGHINPAVTIGLFLVRKVSMVRAVMYMVAHCLVAI 536 KDY +PPP PLF EL WSFYR IAEF+A +G +K+ CA VGI IAW FGGMI LVYCT GISG HINPAVT GLFL RK+S+ RAV Y++ CL AI Sbjct: 31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGV------SKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAI 145 The following BLAST results are available for this feature:
BLAST of FC876299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876299 ID=FC876299; Name=FC876299; organism=Citrus clementina; type=EST; length=539bpback to top |