FC876300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 4.724e-92 Identity = 168/184 (91.30%), Postives = 174/184 (94.57%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQLDY L+ CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGILQQLDYELLDCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 4.724e-92 Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLDY LV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFM+KP RILVK D++TLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDDVTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 6.169e-92 Identity = 168/184 (91.30%), Postives = 174/184 (94.57%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFM+KP RILVK DELTLEGIKQFY+ VE E+WKLE Sbjct: 84 QSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLE 267
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 1.795e-91 Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLD+ L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR D IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFM+KP RILVK DELTLEGIKQFY+ VE EEWKLE Sbjct: 84 QSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLE 267
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 3.385e-90 Identity = 166/184 (90.22%), Postives = 173/184 (94.02%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSGILQQL Y L++CQALVLAPTRELAQQIEKVMRALGDYLGVKV ACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ V+ EEWKLE Sbjct: 85 QSGTGKTATFCSGILQQLAYELLECQALVLAPTRELAQQIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLE 268
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 7.542e-90 Identity = 165/184 (89.67%), Postives = 172/184 (93.48%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFCSG+LQQLD LVQCQALVLAPTRELAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+LQ+GVHVVVGTPGRVFD+LRRQSLR D IKMFVLDEADEMLSRGFKDQIYDIFQLLP+KVQVGVFSATMPPEALEITRKFMNKP RILVK DELTLEGIKQFY+ V+ EEWKLE Sbjct: 86 QSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLE 269
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 5.619e-69 Identity = 129/184 (70.11%), Postives = 150/184 (81.52%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF +LQ++D L QCQAL+LAPTRELAQQI+KV+ ALGD + V+ HAC+GGT VR+D LQAGVHVVVGTPGRV DM++R++L D ++MFVLDEADEMLSRGFKDQIYDIFQLLP QV + SATMP + LE+T KFM P RILVK DELTLEGIKQFY+ VE EEWKL+ Sbjct: 64 QSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLD 247
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 6.869e-67 Identity = 123/184 (66.85%), Postives = 149/184 (80.98%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF +LQ++D + QCQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+D + LQ G VVVGTPGRV DM++R+ L+ D +KMFVLDEADEMLSRGF +QIYDIFQLLP QV + SATMP + LE+T KFM P RILVK DELTLEGIKQFY+ VE EEWKL+ Sbjct: 68 QSGTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLD 251
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 8.971e-67 Identity = 123/184 (66.85%), Postives = 149/184 (80.98%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF +LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+D + LQ G VVVGTPGRV DM++R+ L+ D +KMFVLDEADEMLSRGF +QIYDIFQLLP QV + SATMP + LE+T KFM +P RILVK DELTLEGIKQFY+ VE EEWKL+ Sbjct: 69 QSGTGKTATFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMREPVRILVKKDELTLEGIKQFYIAVEKEEWKLD 252
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 251.521 bits (641), Expect = 1.999e-66 Identity = 122/183 (66.67%), Postives = 149/183 (81.42%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKL 554 QSGTG ATF ILQQ+D + +CQAL+LAPTRELA QI++V+ ALG+Y+ V HAC+GGT+VRED RIL++G HVVVGTPGRV+DM+ R+ LR YIK+FVLDEADEMLSRGFKDQI D+F++LP VQV + SATMPP+ LE++R FM P ILVK +ELTLEGIKQFY+ V+ E WKL Sbjct: 75 QSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKL 257 The following BLAST results are available for this feature:
BLAST of FC876300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876300 ID=FC876300; Name=FC876300; organism=Citrus clementina; type=EST; length=558bpback to top |