FC876300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.097e-64 Identity = 125/185 (67.57%), Postives = 146/185 (78.92%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEAD MLSRGFKDQIY+IFQ L +QV + SATMP + LE+T+KFM P RILVK +ELTLEGIKQFY+ VE EEWKL+ Sbjct: 79 QSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLD 263
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 2.443e-64 Identity = 123/184 (66.85%), Postives = 145/184 (78.80%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF ILQ++D + + QALVLAPTRELAQQI+KV+ ALGDYL V HACVGGT+VRED L G H+VVGTPGRVFDM+ R +L+ + + MF LDEADEMLS GFK+ IY+IFQLLP + QV + SATM PE L++T+KFM P RILVK DELTLEGI+QFY+ VE EEWKLE Sbjct: 73 QSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRILVKKDELTLEGIRQFYINVEKEEWKLE 256
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.191e-64 Identity = 119/184 (64.67%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF ILQ++D + QAL+LAPTRELAQQI+KV+ ALGDY+ + HAC+GGT+VRED L G VVVGTPGRV+DM+ R++ + D +KMF LDEADEMLSRGFKDQ+Y++FQLLP Q + SATMP E LE+T+KFM P RILVK DELTLEGIKQFY+ VE E+WKL+ Sbjct: 83 QSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKIDCHACIGGTNVREDMAKLNEGAQVVVGTPGRVYDMINRRAFKTDQLKMFCLDEADEMLSRGFKDQMYEVFQLLPQDTQCVLLSATMPQEVLEVTKKFMRDPIRILVKRDELTLEGIKQFYVAVEKEDWKLD 266
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.191e-64 Identity = 120/184 (65.22%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GG SVRED + LQ G VVVGTPGRV DM++R+ L+ D++KMFVLDEADEMLS GF +QIYDIFQ LP QV + SATMP + LE+T KFM P RILVK ELTLEGIKQFY+ VE EEWKL+ Sbjct: 70 QSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIYDIFQFLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEEWKLD 253
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.167e-64 Identity = 120/184 (65.22%), Postives = 146/184 (79.35%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF ILQ++D+ QALV+APTRELAQQI+KVM ALG+YL V + C+GGTSVR+DQR L+AG+HVVVGTPGRV DM+ R +L IKMFVLDEADEMLSRGFKDQIY++F+ +P VQV + SATMP E L++T +FM P RILVK DELTLEGI+QFY+ V+ +EWK + Sbjct: 74 QSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFD 257
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.167e-64 Identity = 119/184 (64.67%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF LQ+LD + CQAL+LAPTRELAQQI+KV+ A+GD++ + HAC+GGT+VRED + L G VVVGTPGRV DM++R+ L+ D++K F+LDEADEMLSRGF +QIYDIFQLLP QV + SATMP + LE+T KFM P RILVK ELTLEGIKQFY+ VE EEWKL+ Sbjct: 93 QSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNITCHACIGGTAVREDMKALGEGPEVVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLD 276
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.167e-64 Identity = 117/184 (63.59%), Postives = 145/184 (78.80%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF LQ++D L CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L+AG VVVGTPGR+ DM+ R+ L+ D +K+F+LDEADEMLSRGF +QIYDIFQLLP QV + SATMP + LE+T KFM P RILVK ELTLEGIKQFY+ VE EEWKL+ Sbjct: 70 QSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVRDDMNALRAGPQVVVGTPGRIHDMIERRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQSTQVTLLSATMPQDVLEVTTKFMRDPIRILVKKQELTLEGIKQFYIAVEKEEWKLD 253
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 7.108e-64 Identity = 121/184 (65.76%), Postives = 146/184 (79.35%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF LQ++DY L CQ L+LAPTRELAQQI+KV ALGDY ++ HACVGGTSVR+D L++GVH+VVGTPGRVFDML + LR D +K+F+LDEADEMLSRGFK QI+DIF+ LP VQV +FSATMP E L +T +FM P RILVK +ELTLEGI+QFY+ VE +EWK++ Sbjct: 76 QSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQDVQVALFSATMPNEILHLTTQFMRDPKRILVKQEELTLEGIRQFYVGVEKDEWKMD 259
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 9.283e-64 Identity = 116/184 (63.04%), Postives = 145/184 (78.80%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L+ G +VVGTPGR+ DM++R+ L+ D +KMF+LDEADEMLSRGF +QIYDIFQLLP QV + SATMP + LE+T KFM P RILVK ELTLEGIKQFY+ VE EEWKL+ Sbjct: 93 QSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLD 276
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.212e-63 Identity = 120/184 (65.22%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ V+ HAC+GGT+VRED + L G VVVGTPGRV DM++R+ L+ D +KMFVLDEADEMLSRGF +QIYDIFQ LP QV + SATMP + L++T KFM P RILVK ELTLEGIKQFY+ VE EEWKL+ Sbjct: 70 QSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSVECHACIGGTNVREDIKALNDGPQVVVGTPGRVHDMIQRRVLKTDQMKMFVLDEADEMLSRGFTEQIYDIFQFLPQSTQVVLLSATMPQDVLDVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEEWKLD 253 The following BLAST results are available for this feature:
BLAST of FC876300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876300 ID=FC876300; Name=FC876300; organism=Citrus clementina; type=EST; length=558bpback to top |