FC876300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2) HSP 1 Score: 241.506 bits (615), Expect = 2.068e-63 Identity = 115/184 (62.50%), Postives = 145/184 (78.80%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF LQ++D L CQAL++APTRELAQQI+KV+ A+GD++ + HAC+GGT++R+D + LQ G +VVGTPGR+ DM++R+ L+ D +K+F+LDEADEMLSRGF +QIYDIFQLLP QV + SATMP + LE+T KFM P RILVK ELTLEGIKQFY+ VE EEWKL+ Sbjct: 68 QSGTGKTATFSISALQKIDPNLKACQALIVAPTRELAQQIQKVVVAIGDFMNINCHACIGGTAIRDDMKALQEGPPIVVGTPGRIQDMIQRRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQATQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLD 251
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 2.701e-63 Identity = 119/184 (64.67%), Postives = 145/184 (78.80%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFC +LQ LD + + QAL+LAPT+ELA+QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 86 QSGTGKTATFCVSVLQCLDIQIRETQALILAPTKELARQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 269
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 3.528e-63 Identity = 120/184 (65.22%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 87 QSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 270
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 3.528e-63 Identity = 120/184 (65.22%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 78 QSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 261
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 3.528e-63 Identity = 120/184 (65.22%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 87 QSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 270
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_SALSA (Eukaryotic initiation factor 4A-III OS=Salmo salar GN=eif4a3 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 7.859e-63 Identity = 119/184 (64.67%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ H+C+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 78 QSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 261
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_TAEGU (Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 3.302e-61 Identity = 118/184 (64.13%), Postives = 142/184 (77.17%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 82 QSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 265
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_RAT (Eukaryotic initiation factor 4A-III OS=Rattus norvegicus GN=Eif4a3 PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 3.302e-61 Identity = 118/184 (64.13%), Postives = 142/184 (77.17%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 83 QSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_PIG (Eukaryotic initiation factor 4A-III OS=Sus scrofa GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 3.302e-61 Identity = 118/184 (64.13%), Postives = 142/184 (77.17%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 83 QSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
BLAST of FC876300 vs. ExPASy Swiss-Prot
Match: IF4A3_MOUSE (Eukaryotic initiation factor 4A-III OS=Mus musculus GN=Eif4a3 PE=2 SV=3) HSP 1 Score: 234.187 bits (596), Expect = 3.302e-61 Identity = 118/184 (64.13%), Postives = 142/184 (77.17%), Query Frame = 3 Query: 6 QSGTGNPATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPARILVKLDELTLEGIKQFYLTVENEEWKLE 557 QSGTG ATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P RILVK DELTLEGIKQF++ VE EEWK + Sbjct: 83 QSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266 The following BLAST results are available for this feature:
BLAST of FC876300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876300 ID=FC876300; Name=FC876300; organism=Citrus clementina; type=EST; length=558bpback to top |