FC876306

Overview
NameFC876306
Unique NameFC876306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: ACS4_RUTGR (Probable acridone synthase 4 OS=Ruta graveolens GN=ACS4 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.546e-53
Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = 2
Query:   23 QESRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            +E R AQ ++GPA +LAIGTATP +   QADYPDYYFR+TKSEHMTELK+KF+ +C+KSMI+KR+M  +EE LK NP +  +M  SL+ARQDI V E P+LG EAA KAIKEWGQPKS ITHLIFC+++GVDMPGADYQLT
Sbjct:    5 KEMRKAQMSEGPAAILAIGTATPNNVYMQADYPDYYFRMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVSKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLT 145          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 5.873e-53
Identity = 96/139 (69.06%), Postives = 119/139 (85.61%), Query Frame = 2
Query:   29 SRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            SR A+R +G A +LAIGTATPA  V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V+EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   13 SRRAKRLEGDAKILAIGTATPASWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLT 151          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.308e-52
Identity = 95/139 (68.35%), Postives = 119/139 (85.61%), Query Frame = 2
Query:   29 SRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            SR A+R +G A +LA+GTATPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQD +V+EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   11 SRRAKRFEGHAKILAVGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDTLVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLT 149          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.232e-52
Identity = 96/136 (70.59%), Postives = 118/136 (86.76%), Query Frame = 2
Query:   38 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LKENPN+C Y   SL+ RQDI+V+EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKENPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLT 149          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.915e-52
Identity = 95/139 (68.35%), Postives = 119/139 (85.61%), Query Frame = 2
Query:   29 SRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            SR  +R +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ + KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V+EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   13 SRREKRFEGHAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLDHKEKFRRICNKSKIRKRHMILTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLT 151          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 4.972e-52
Identity = 94/139 (67.63%), Postives = 118/139 (84.89%), Query Frame = 2
Query:   29 SRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            S  A+R +G A +LAIGTATPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V+EVPKLGK+AA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   13 SHRAKRLEGDAKILAIGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIMKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKDAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLT 151          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.108e-51
Identity = 94/139 (67.63%), Postives = 118/139 (84.89%), Query Frame = 2
Query:   29 SRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            S  A++ +G A + AIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+VAEVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   13 SPRAKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVAEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLT 151          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.889e-51
Identity = 94/136 (69.12%), Postives = 118/136 (86.76%), Query Frame = 2
Query:   38 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LT+E+LK+NPN+C Y   SL+ RQDI+V+EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTKELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLT 149          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 5.497e-51
Identity = 92/138 (66.67%), Postives = 117/138 (84.78%), Query Frame = 2
Query:   29 SRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL 442
            +R  +R DG A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V+EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL
Sbjct:   13 TRREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQL 150          
BLAST of FC876306 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 9.376e-51
Identity = 96/141 (68.09%), Postives = 119/141 (84.40%), Query Frame = 2
Query:   29 SRNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVAEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLT 445
            SR A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V+EVPKLGKEAA KAIK WG+P S+ITHL+FCTTSGVDMPGAD+QLT
Sbjct:   13 SRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHMVLTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKVWGRPISEITHLVFCTTSGVDMPGADFQLT 153          
The following BLAST results are available for this feature:
BLAST of FC876306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
ACS4_RUTGR1.546e-5368.79Probable acridone synthase 4 OS=Ruta graveolens GN... [more]
CHSB_IPOPU5.873e-5369.06Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSA_IPOPL1.308e-5268.35Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
CHSA_IPOCO2.232e-5270.59Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOCO2.915e-5268.35Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
CHSA_IPOPU4.972e-5267.63Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]
CHSB_IPONI1.108e-5167.63Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOTF1.889e-5169.12Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSC_IPOPU5.497e-5166.67Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSB_IPOTF9.376e-5168.09Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]

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Properties
Property NameValue
Genbank descriptionC32003B09EF DevOvary1 Citrus clementina cDNA clone C32003B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876306 ID=FC876306; Name=FC876306; organism=Citrus clementina; type=EST; length=456bp
TCTTGTACAAAGGTGGCCGTATCAAGAAAGCAGAAACGCTCAGCGTGCCG
ACGGACCGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGT
GTCAACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGA
GCATATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGA
TGATTAAGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAAC
CCCAACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACAT
TGTGGTGGCCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACCAAGGCCA
TCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGC
ACCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAACTG
ATCGGC
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