FC876309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.967e-40 Identity = 89/149 (59.73%), Postives = 101/149 (67.79%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVFQ 574 FP + G + + + KDY +PPP P F+ EL+ WSFYRA IAEFIA +G K A N+ CA VGI GIAWAFGGMIF LVYCTA ISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ Sbjct: 15 FPERQPIGTS---AQTDKDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ 154
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 7.793e-40 Identity = 89/149 (59.73%), Postives = 99/149 (66.44%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVFQ 574 FP + G A +KDY +PPP P F+ EL WSFYRA IAEFIA +G K A N+ CA VGI GIAWAFGGMIF LVYCTA ISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ Sbjct: 15 FPERQPIGTA--AQTESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ 155
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 1.736e-39 Identity = 85/142 (59.86%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 149 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVFQ 574 G A G+ KDY +PP P+F+ ELT WSFYRA IAEF+A +G K+ CA VGI GIAW+FGGMIF LVYCTA ISGGHINPAVTFGLFLARK+SL RAV YM QCLGAI G G+VK FQ Sbjct: 22 GTAAQGA-EEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVN------KSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQ 156
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.736e-39 Identity = 85/152 (55.92%), Postives = 100/152 (65.79%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSA---KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVFQ 574 F + G A G+ + KDY +PPP PLF+ EL WSFYRA IAEF+A +G +K+ CA VGI GIAW+FGGMIF LVYCTA ISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAI G G+VK FQ Sbjct: 15 FSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQ 160
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.268e-39 Identity = 86/149 (57.72%), Postives = 101/149 (67.79%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVFQ 574 FP + G + + S KDY +PPP P F+ EL+ WSF+RA IAEFIA +G K ++ + CA VGI GIAWAFGGMIF LVYCTA ISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ Sbjct: 15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ 154
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.268e-39 Identity = 86/149 (57.72%), Postives = 101/149 (67.79%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVFQ 574 FP + G + + S KDY +PPP P F+ EL+ WSF+RA IAEFIA +G K ++ + CA VGI GIAWAFGGMIF LVYCTA ISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ Sbjct: 15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ 154
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.868e-39 Identity = 82/131 (62.60%), Postives = 93/131 (70.99%), Query Frame = 2 Query: 179 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVF 571 KDY +PPP PLF+ EL+ WSFYRA IAEF+A +G K ++ C+ VGI G+AWAFGGMIF LVYCTA ISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAI G G+VK F Sbjct: 30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLK------RSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGF 154
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.274e-38 Identity = 83/155 (53.55%), Postives = 101/155 (65.16%), Query Frame = 2 Query: 107 LQIIVTGFPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVF 571 +++ V FP + G A +DY++PP PLF+A EL+ WSFYRA IAEF+A +G +K+ C VGI GIAWAFGGMIF LVYCTA +SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+ G G+VK F Sbjct: 15 VRVGVDRFPERQPIGTAADDL--GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGV------SKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF 161
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.227e-36 Identity = 76/129 (58.91%), Postives = 87/129 (67.44%), Query Frame = 2 Query: 179 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVK 565 KDY DPPP PL D EL KWS YRA IAEF A IG K Q+ G G G+LGIAWAFGG+IFVLVYCTA ISGGH+NPAVTF + LAR+VSL RA +Y +AQC+GA+ G GL + Sbjct: 12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQS-------GEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLAR 133
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.227e-36 Identity = 82/142 (57.75%), Postives = 94/142 (66.20%), Query Frame = 2 Query: 149 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKVFQ 574 G A G+ KDY +PPP PLF+ EL WSFYR IAEF+A +G +K+ CA VGI GIAW+FGGMI LVYCTA ISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAI G G+VK FQ Sbjct: 22 GTAAQGT-DDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGV------SKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQ 155 The following BLAST results are available for this feature:
BLAST of FC876309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876309 ID=FC876309; Name=FC876309; organism=Citrus clementina; type=EST; length=581bpback to top |