FC876309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.412e-11 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 248 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV 562 RA +AEFI+ I + TD +G+ +A AFG +FV V A+ISGGH+NPAVTFG+ L ++L+R ++Y +AQ LG+++ L+ Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTP--SGLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL 122
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.456e-11 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV 562 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA+ Y+VAQ LGA++G ++ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVL 104
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.456e-11 Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV 562 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA+ YM AQ LGA++G ++ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVL 104
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.456e-11 Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV 562 E+ +F++A+ AEF+A + + S IL I+ AFG I L +SGGHINPA+T L + ++SL+RAV Y+ AQ +GAI+G G++ Sbjct: 4 EVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL 105
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11 Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKV 568 EL+ +A +AEFI+ + + TD G++ + A +FV V A+ISGGH+NPAVTFG F+ +SL++A++Y VAQ LG++ L+K+ Sbjct: 13 ELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGG----AATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKI 123
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 356 CAGVGI------LGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKV 568 C GV I + IA FG +I +V C +SG HINPAVT GL + +S+++A+ Y++ QC+GAI+G ++KV Sbjct: 47 CTGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKV 123
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11 Identity = 38/114 (33.33%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVK 565 E T+ +A +AEFI+ + + T+ +G+ +A AFG +FV V A+ISGGH+NPAVTFG F+ ++L+R ++Y +AQ LG++ ++K Sbjct: 13 EATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTP--SGLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK 122
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11 Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV 562 E+ +F++A+ AEF+A + + S IL I+ AFG I L +SGGHINPA+T L + ++SL+RA+ Y+ AQ +GAI+G G++ Sbjct: 4 EVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL 105
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV 562 E T +A +AEFI+ I Y T+ DG A G++ + A +FV V A+ISGGH+NPAVTFG F+ ++L+R ++Y++AQ LG+I L+ Sbjct: 13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALL 121
BLAST of FC876309 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11 Identity = 41/113 (36.28%), Postives = 58/113 (51.33%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTASISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV 562 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA YM AQ LGA++G ++ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL 104 The following BLAST results are available for this feature:
BLAST of FC876309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876309 ID=FC876309; Name=FC876309; organism=Citrus clementina; type=EST; length=581bpback to top |