FC876315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.503e-56 Identity = 103/189 (54.50%), Postives = 132/189 (69.84%), Query Frame = 1 Query: 103 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 V+F+E+F DGW RW+ S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK + LV QF+VKHEQ +DCGGGY+KL +DQK GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RPD Y + IDN + +SGSL DWD LPP+ Sbjct: 21 VYFKEQFLDGDGWTERWIESKHKSD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQPLVVQFTVKHEQNIDCGGGYVKLFPAGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPK 206 HSP 2 Score: 25.0238 bits (53), Expect = 3.503e-56 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DPDA KPE Sbjct: 204 PPKKIKDPDASKPE 217
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.242e-55 Identity = 102/189 (53.97%), Postives = 132/189 (69.84%), Query Frame = 1 Query: 103 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 V+F+E+F DGW RW+ S K D G++ ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DCGGGY+KL +DQ GD+ Y+IMFGPDICG TKKVH I Y G N LI K++ C+ D+ TH+YT I+RP+ Y + IDN + +SGSL DWD LPP+ Sbjct: 21 VYFKEQFLDGDGWTERWIESKHKPD---FGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPAGLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPNNTYEVKIDNSQVESGSLEDDWDFLPPK 206 HSP 2 Score: 24.6386 bits (52), Expect = 2.242e-55 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DPDA KPE Sbjct: 204 PPKKIKDPDAAKPE 217
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_CAEBR (Calreticulin OS=Caenorhabditis briggsae GN=crt-1 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.871e-54 Identity = 102/189 (53.97%), Postives = 136/189 (71.96%), Query Frame = 1 Query: 103 VFFEERFDDG-WESRWVTSDWKKDENTAGEWNYTAGKW-NGDPNDKGIQTSEDYRFYAISAEFP-EFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 V+F+E F+D WE RWV S K D G + +AGK+ + + D+GIQTS+D +FY+ +A+F EFSNK KTLV Q++VKHEQ +DCGGGY+K++ G+ D F G+TPY++MFGPDICG T++VH IL Y G NKLIKKE+ C++D+LTH+YT IL D Y + ID Q+GSL DWDLLP + Sbjct: 17 VYFKEEFNDASWEKRWVQSKHKDD---FGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFDKEFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRGDADLADFHGETPYNVMFGPDICG-PTRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNADNTYEVKIDGESAQTGSLEEDWDLLPAK 201 HSP 2 Score: 27.7202 bits (60), Expect = 1.871e-54 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P+K I DPDAKKPE Sbjct: 199 PAKKIKDPDAKKPE 212
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_CAEEL (Calreticulin OS=Caenorhabditis elegans GN=crt-1 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.652e-53 Identity = 100/189 (52.91%), Postives = 135/189 (71.43%), Query Frame = 1 Query: 103 VFFEERFDDG-WESRWVTSDWKKDENTAGEWNYTAGKW-NGDPNDKGIQTSEDYRFYAISAEFP-EFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 V+F+E F+D WE RWV S K D G + +AGK+ + + D+GIQTS+D +FY+ +A+F +FSNK KTLV Q++VKHEQ +DCGGGY+K++ + D F G+TPY++MFGPDICG T++VH IL Y G NKLIKKE+ C++D+LTH+YT IL D Y + ID Q+GSL DWDLLP + Sbjct: 17 VYFKEEFNDASWEKRWVQSKHKDD---FGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICG-PTRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAK 201 HSP 2 Score: 27.7202 bits (60), Expect = 2.652e-53 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P+K I DPDAKKPE Sbjct: 199 PAKKIKDPDAKKPE 212
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_ONCVO (Calreticulin OS=Onchocerca volvulus GN=crt-1 PE=2 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 9.987e-53 Identity = 96/189 (50.79%), Postives = 131/189 (69.31%), Query Frame = 1 Query: 103 VFFEERF-DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDP-NDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 ++F+E F DD WE RW+ S K D G+W + GK+ GD DKG++T++D +FY+I A+F + FSNK K+LV QFSVKHEQ +DCGGGY+KL++ +V+ + G+TPY IMFGPDICG TKKVH I Y N +IKK++ C+ D TH+YT I+ D Y + ID + +SG L +DWD LPP+ Sbjct: 19 IYFKEDFSDDDWEKRWIKSKHKDD---FGKWEISHGKFYGDAVKDKGLKTTQDAKFYSIGAKFDKSFSNKGKSLVIQFSVKHEQDIDCGGGYVKLMASDVNLEDSHGETPYHIMFGPDICGPGTKKVHVIFHYKDRNHMIKKDIRCKDDVFTHLYTLIVNSDNTYEVQIDGEKAESGELEADWDFLPPK 204 HSP 2 Score: 26.9498 bits (58), Expect = 9.987e-53 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P K I DPDAKKPE Sbjct: 202 PPKKIKDPDAKKPE 215
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_EUGGR (Calreticulin OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.954e-52 Identity = 103/188 (54.79%), Postives = 133/188 (70.74%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDP-NDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 ++++E F+ WE+RW S K D G++ T+GK+ GD D GIQTS+D +FYAIS+ FSN+ K LV QFSVKHEQ +DCGGGY+KLL VD KF GDTPY IMFGPDICG +TKK+H ILTY G N L KKE CETD L+H YT +++ D Y +L+D V+K+SG+L DW++L P+ Sbjct: 20 IYYKETFEPDWETRWTHSTAKSDY---GKFKLTSGKFYGDKAKDAGIQTSQDAKFYAISSPIASSFSNEGKDLVLQFSVKHEQDIDCGGGYLKLLPS-VDAAKFTGDTPYHIMFGPDICG-ATKKIHFILTYKGKNLLWKKEPRCETDTLSHTYTAVIKADRTYEVLVDQVKKESGTLEEDWEILKPK 202
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_DROME (Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 3.132e-51 Identity = 99/188 (52.66%), Postives = 124/188 (65.96%), Query Frame = 1 Query: 103 VFFEERFD-DGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 V+ +E FD + WE W+ S K G++ T G + D DKGIQTS+D RFYA S +F FSN+DK LV QFSVKHEQ +DCGGGY+KL +DQ G++PY IMFGPDICG TKKVH I +Y G N LI K++ C+ D TH YT I+RPD Y +LIDN + +SG+L DWD L P+ Sbjct: 21 VYLKENFDNENWEDTWIYS--KHPGKEFGKFVLTPGTFYNDAEADKGIQTSQDARFYAASRKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGPDICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWDFLAPK 206 HSP 2 Score: 22.7126 bits (47), Expect = 3.132e-51 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 660 TIXDPDAKKPE 692 TI DPD KKPE Sbjct: 224 TIPDPDDKKPE 234
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_SCHMA (Calreticulin OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 3.695e-49 Identity = 92/188 (48.94%), Postives = 127/188 (67.55%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDP-NDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPR 660 V+F E F + WV S + ++ GE+ AGK DP D G++T++D RFY I+ + E FSN+ KT+V QF+VK ++ + CGG Y+KLL ++D KKF G++PY IMFGPDICG +TKKVH I Y G N LIKKE+PC+ D TH+YT I+ P+ Y +L+DN + + GSL DWD+LPP+ Sbjct: 19 VWFSETFPNESIENWVQSTYNAEKQ--GEFKVEAGKSPVDPIEDLGLKTTQDARFYGIARKISEPFSNRGKTMVLQFTVKFDKTVSCGGAYIKLLGSDIDPKKFHGESPYKIMFGPDICGMATKKVHVIFNYKGKNHLIKKEIPCKDDLKTHLYTLIVNPNNKYEVLVDNAKVEEGSLEDDWDMLPPK 204 HSP 2 Score: 22.3274 bits (46), Expect = 3.695e-49 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 657 KTIXDPDAKKPE 692 KTI D DAKKP+ Sbjct: 238 KTIPDMDAKKPD 249
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR3_MOUSE (Calreticulin-3 OS=Mus musculus GN=Calr3 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.449e-47 Identity = 92/185 (49.73%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 103 VFFEERFDDG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDL 648 V+F+E F DG W +RWV S +++ G + ++GK+ G DKG+QT+++ RFYAISA F FSNK KTLV Q++VKHEQK+DCGGGY+K+ ++DQKK G + Y IMFGPDICG+ KKVH IL + KK + C+ D TH+YT ILRPD Y + +D +SGS+ DW+L Sbjct: 21 VYFQEEFLDGERWRNRWVQST---NDSQFGHFRVSSGKFYGHKEKDKGLQTTQNSRFYAISASFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPSDLDQKKMNGKSQYYIMFGPDICGFDIKKVHVILYFKNQYHENKKPIRCKVDGFTHLYTLILRPDLSYEVKVDGQSIESGSIEYDWNL 202
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR3_HUMAN (Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.227e-46 Identity = 91/185 (49.19%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 103 VFFEERFDDG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDL 648 V+F+E F DG W +RW+ S +++ G + ++GK+ G DKG+QT+++ RFYAISA F FSNK KTLV Q++VKHEQK+DCGGGY+K+ ++DQK G + Y IMFGPDICG+ KKVH IL + KK + C+ D TH+YT ILRPD Y + ID +SGS+ DW+L Sbjct: 21 VYFQEEFLDGEHWRNRWLQST---NDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVFPADIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILHFKNKYHENKKLIRCKVDGFTHLYTLILRPDLSYDVKIDGQSIESGSIEYDWNL 202 The following BLAST results are available for this feature:
BLAST of FC876315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876315 ID=FC876315; Name=FC876315; organism=Citrus clementina; type=EST; length=694bpback to top |