FC876315

Overview
NameFC876315
Unique NameFC876315
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR3_BOVIN (Calreticulin-3 OS=Bos taurus GN=CALR3 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.227e-46
Identity = 90/185 (48.65%), Postives = 120/185 (64.86%), Query Frame = 1
Query:  103 VFFEERFDDG--WESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDL 648
            V+F+E F DG  W +RWV S    +++  G +  ++G + G    DKG+QT+++ RFYAISA F  FSNK KTL+ Q++VKHEQK+DCGGGY+KL   +VDQK   G + Y IMFGPDICG+  K VH IL +       KK + C+ D  TH+YT +LRPD  Y + ID    +SGS+  DW L
Sbjct:   21 VYFQEEFLDGERWRNRWVHST---NDSQFGHFRLSSGNFYGHKEKDKGLQTTQNSRFYAISARFKPFSNKGKTLIIQYTVKHEQKMDCGGGYIKLFPADVDQKNLNGKSQYYIMFGPDICGFDIKTVHVILHFKNQYHANKKSIRCKVDSFTHLYTLVLRPDLTYEVKIDGQSIESGSIEYDWQL 202          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.661e-29
Identity = 77/193 (39.90%), Postives = 103/193 (53.37%), Query Frame = 1
Query:  109 FEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVD---QKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP 657
            F E FD+ ++ RW+ SD K+D N  G W +     +   +D G+  SE  R YAI  E  E  S KD T+V QF  + +  L+CGG Y+K L  +      K+F  ++PYSIMFGPD CG +T KVH I  +            +K      +D+LTHVYT IL+PD    ILID  EK+  +  S  D  PP
Sbjct:   40 FYESFDEDFDGRWIVSD-KEDYN--GVWKHAKSDGH---DDYGLLVSEQARKYAIVKELAESVSLKDGTVVLQFETRLQNGLECGGAYIKYLRPQESGWKPKEFDNESPYSIMFGPDKCG-ATNKVHFIFKHKNPKSGEYVEHHLKYPPSVPSDKLTHVYTAILKPDNELQILIDGEEKKKANFLSSEDFEPP 225          

HSP 2 Score: 28.8758 bits (63), Expect = 4.661e-29
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            PSKTI DPD KKPE
Sbjct:  228 PSKTIPDPDDKKPE 241          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27
Identity = 78/196 (39.80%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  109 FEERFDDGWESRWVTSDWKKDENTAGE-WNYTAGKW--------NGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLL--SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEV----PCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDW 642
            F E+F   W+SRW  S  KK+++ + E W Y  G+W        NG   DKG+        +AISA+FP+   NK KTLV Q+ VK +  L CGG YMKLL  + ++  ++F   TPY IMFGPD CG +T KVH I  +    T +  +K +       T +LT +YT I++PD  + ILID    ++G+L  D+
Sbjct:   50 FLEQFTADWDSRWTPSHAKKEDSKSEEDWAYV-GEWAVEEPTVLNGMVGDKGLVVKNVAAHHAISAKFPKKIDNKGKTLVVQYEVKPQNSLVCGGAYMKLLQENKKLHAEEFSNATPYVIMFGPDKCG-ATNKVHFIFRHKNPKTGEYEEKHMTAPPAARTTKLTTLYTLIVKPDQSFQILIDGEAVKNGTLLEDF 243          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.404e-26
Identity = 70/192 (36.46%), Postives = 102/192 (53.12%), Query Frame = 1
Query:  109 FEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEV---DQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLP 654
            F E FD+ +E  W+ S+    E+  GEW ++  + +   +D G+  S+  R YAI  E  +    KD T+V Q+ V+ +  L+CGG Y+K L  +      K F  ++PYSIMFGPD CG +T KVH IL +            +K      +D+LTHVYT +++PD    ILID  EK+  +  S  D  P
Sbjct:   35 FYESFDESFEGSWIVSE---KEDYPGEWKHSKSEGH---DDYGLLVSDKARKYAIVKELEKPVELKDGTIVLQYEVRLQNGLECGGAYLKYLRPQDAGWTAKGFDNESPYSIMFGPDKCG-ATNKVHFILKHKNPKSGDYVEHHLKFPPSVPSDKLTHVYTAVIKPDNELVILIDGEEKKKANFLSSEDFEP 219          

HSP 2 Score: 27.7202 bits (60), Expect = 3.404e-26
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P+KTI DPD KKPE
Sbjct:  223 PTKTIPDPDDKKPE 236          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.770e-24
Identity = 77/210 (36.67%), Postives = 108/210 (51.43%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP-RPSR 669
            V+F + FD G  S W+ S  KKD+ T  E     GKW  D       P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E++  +F   TPY+IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT IL PD  + IL+D     SG+L +  D+ PP  PSR
Sbjct:   70 VYFADSFDRGSLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTSELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLN--DMTPPVNPSR 275          

HSP 2 Score: 22.7126 bits (47), Expect = 1.770e-24
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            PS+ I DP+ +KPE
Sbjct:  273 PSREIEDPEDRKPE 286          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.770e-24
Identity = 78/210 (37.14%), Postives = 108/210 (51.43%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG--EVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP-RPSR 669
            V+F + FD G  S W+ S  KKD+ T  E     GKW  D       P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E++  +F   TPY+IMFGPD CG    K+H I  +      I +E   +          TD+ TH+YT IL PD  + IL+D     SG+L +  D+ PP  PSR
Sbjct:   69 VYFADSFDRGTLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLN--DMTPPVNPSR 274          

HSP 2 Score: 22.7126 bits (47), Expect = 1.770e-24
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            PS+ I DP+ +KPE
Sbjct:  272 PSREIEDPEDRKPE 285          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.772e-24
Identity = 71/192 (36.98%), Postives = 104/192 (54.17%), Query Frame = 1
Query:  109 FEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVD---QKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVP----CETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLP 654
            F E FD+ +++RW+ S  K++ N  G W ++  + +   +D G+  SE  R YAI  E     S KD T+V QF  + +  L+CGG Y+K L  +      K F  ++ YSIMFGPD CG +T KVH I  +    T K ++  +       +D+L+HVYT +L+ D   SILID  EK+  +  S  D  P
Sbjct:   41 FYESFDEDFDNRWIVSG-KEEYN--GVWKHSKSEGH---DDFGLLVSEPARKYAIVKELDAPVSLKDGTVVLQFETRLQNGLECGGAYIKYLQTQESGWKPKGFDNESGYSIMFGPDRCG-ATNKVHFIFRHKNPKTGKHVEHHLKFPPSVPSDKLSHVYTAVLKDDNEVSILIDGEEKKKANFLSSEDFEP 225          

HSP 2 Score: 28.8758 bits (63), Expect = 1.772e-24
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            PSKTI DPD KKPE
Sbjct:  229 PSKTIPDPDDKKPE 242          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.773e-24
Identity = 69/190 (36.32%), Postives = 99/190 (52.11%), Query Frame = 1
Query:  115 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSN-KDKTLVFQFSVKHEQKLDCGGGYMKLLSGEV---DQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLP 654
            E FD+ ++ RW+ S   K+ +  G W +   + +    D G+  SE  R Y I  E  E  N K+ T+V Q+ V+ ++ L+CGG Y+K L  +      + F  ++PYSIMFGPD CG  T KVH IL +            +K       D+L+HVYT IL+PD    IL+D  EK+  +L S  D  P
Sbjct:   33 ESFDEPFDGRWIVS---KNSDYEGVWKHAKSEGH---EDYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG-GTNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEP 215          

HSP 2 Score: 26.1794 bits (56), Expect = 1.773e-24
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            P+KTI DP+ KKPE
Sbjct:  219 PAKTIPDPEDKKPE 232          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.303e-24
Identity = 77/210 (36.67%), Postives = 107/210 (50.95%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP-RPSR 669
            V+F + FD G  S W+ S  KKD+ T  E     GKW  D       P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E+   +F   TPY+IMFGPD CG    K+H I  +      + +E   +          TD+ TH+YT IL PD  + IL+D     SG+L +  D+ PP  PSR
Sbjct:   70 VYFADSFDRGSLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTAELSLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLN--DMTPPVNPSR 275          

HSP 2 Score: 22.7126 bits (47), Expect = 2.303e-24
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            PS+ I DP+ +KPE
Sbjct:  273 PSREIEDPEDRKPE 286          
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.997e-24
Identity = 75/209 (35.89%), Postives = 107/209 (51.20%), Query Frame = 1
Query:  103 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG--EVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP-RPSR 669
            V+F + FD G  S W+ S  KKD+         G+W     K +  P DKG+      + +AISA+  + F    K L+ Q+ V  +  ++CGG Y+KLLS   E++  +F   TPY+IMFGPD CG    K+H I  +      I +E   +          TD+ TH+YT IL PD  + IL+D     SG+L +  D+ PP  PSR
Sbjct:   69 VYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLN--DMTPPVNPSR 274          

HSP 2 Score: 22.7126 bits (47), Expect = 2.997e-24
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  651 PSKTIXDPDAKKPE 692
            PS+ I DP+ +KPE
Sbjct:  272 PSREIEDPEDRKPE 285          
The following BLAST results are available for this feature:
BLAST of FC876315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CALR3_BOVIN1.227e-4648.65Calreticulin-3 OS=Bos taurus GN=CALR3 PE=2 SV=1[more]
CALX_SOYBN4.661e-2939.90Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX_ASPFU1.275e-2739.80Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
CALX_HELTU3.404e-2636.46Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
CALX_RAT1.770e-2436.67Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1[more]
CALX_PONAB1.770e-2437.14Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2[more]
CALX_PEA1.772e-2436.98Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX1_ARATH1.773e-2436.32Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX_MOUSE2.303e-2436.67Calnexin OS=Mus musculus GN=Canx PE=1 SV=1[more]
CALX_HUMAN2.997e-2435.89Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32003C07EF DevOvary1 Citrus clementina cDNA clone C32003C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876315 ID=FC876315; Name=FC876315; organism=Citrus clementina; type=EST; length=694bp
GGAGAGCACTTCCTCTCTCTCGCTCTAAAAATGGCGAAATTAAACCCTAG
CTTTCTCTCTCTAACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTC
ACGTCTTCTTCGAAGAACGCTTTGACGATGGATGGGAAAGCCGGTGGGTT
ACATCTGATTGGAAGAAAGATGAGAACACGGCTGGAGAATGGAACTACAC
TGCTGGGAAATGGAATGGGGACCCGAATGATAAAGGTATTCAAACTAGTG
AAGACTACAGGTTCTATGCTATTTCAGCTGAATTCCCTGAATTCAGCAAC
AAGGACAAGACACTCGTGTTCCAGTTTTCTGTTAAGCACGAACAGAAGCT
TGACTGTGGTGGTGGCTACATGAAGTTGCTTAGTGGCGAAGTTGATCAGA
AGAAATTTGGTGGTGATACCCCTTACAGTATCATGTTTGGACCAGATATC
TGTGGTTATAGCACTAAGAAAGTGCATGCCATTCTTACCTACAATGGAAC
AAACAAATTGATCAAGAAGGAAGTACCATGTGAGACTGACCAACTCACTC
ATGTTTATACTTTCATCCTCCGTCCAGATGCTCCTTACAGCATCCTCATT
GACAATGTGGAGAAACAATCTGGTAGCTTGTACTCTGATTGGGATCTCCT
CCCTCCAAGACCATCNAGGATCCTGACGCCAAGAAACCTGAAGA
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