FC876315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_CANFA (Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 3.899e-24 Identity = 77/210 (36.67%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG--EVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP-RPSR 669 V+F + FD G S W+ S KKD+ T E GKW D P DKG+ + +AISA+ + F K L+ Q+ V + ++CGG Y+KLLS E++ +F TPY+IMFGPD CG K+H I + + +E + TD+ TH+YT IL PD + IL+D SG+L + D+ PP PSR Sbjct: 70 VYFADSFDRGTLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLLN--DMTPPVNPSR 275 HSP 2 Score: 22.3274 bits (46), Expect = 3.899e-24 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 PS+ I DP+ +KPE Sbjct: 273 PSREIEDPEDQKPE 286
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23 Identity = 75/218 (34.40%), Postives = 107/218 (49.08%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGE--VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP--RPSRILTPRNLK 693 V+F E FD G + WV S KKD+ A G W K N P D+G+ + +AISA + F DK LV Q+ V + +DCGG Y+KLL+ ++ + F T Y+IMFGPD CG K+H I + + +E + TD+ TH+YT ++ PD + +LID + GSL D++PP P I P + K Sbjct: 56 VYFTETFDSGRLAGWVLSKAKKDDIDAEISIYDGRWEIEELKENRIPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLVVQYEVNFQDGIDCGGAYIKLLADTDGLNLENFYDKTSYTIMFGPDKCG-EDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKRFFTDRKTHLYTLVMNPDDTFEVLIDQIVVNKGSLLE--DVVPPINPPKEIEDPTDEK 270
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.074e-23 Identity = 68/194 (35.05%), Postives = 100/194 (51.55%), Query Frame = 1 Query: 115 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFP---EFSNKDKTLVFQFSVKHEQKLDCGGGYMKLL----SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP 657 E FD+ ++ RWV S+ + + G W + + + +D G+ SE + Y I E + + T+V Q+ + ++ L+CGG Y+K L +G V Q F D+PYSIMFGPD CG +T KVH IL + +K D L+HVYT +L+ D IL+D EK+ G+L S D PP Sbjct: 33 ESFDEPFDGRWVVSEKAEYQ---GVWKHEKSEGH---DDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQG-FDNDSPYSIMFGPDKCG-ATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPP 218 HSP 2 Score: 27.335 bits (59), Expect = 7.074e-23 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 PSKTI DP+ KKPE Sbjct: 221 PSKTIPDPEDKKPE 234
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.631e-22 Identity = 68/204 (33.33%), Postives = 102/204 (50.00%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP 657 V+F E FD G + WV S KKD+ + G W K N P D+G+ + +AI+A + F DK L+ Q+ V + +DCGG Y+KLL+ G++ + F T Y+IMFGPD CG K+H I + + +E + TD+ TH+YT ++ PD + +LID G+L D++PP Sbjct: 60 VYFTETFDSGNLAGWVLSKAKKDDMDSEIAIYDGRWEIEELKENQVPGDRGLVLKSKAKHHAIAAVLEKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCG-EDYKLHLIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEVLIDQKVVNQGTLLD--DVVPP 260 HSP 2 Score: 21.1718 bits (43), Expect = 2.631e-22 Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 3 Query: 651 PSKTIXDPDAKKPE 692 P + I DP KKPE Sbjct: 263 PPREIDDPSDKKPE 276
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CLGN_HUMAN (Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.694e-22 Identity = 73/218 (33.49%), Postives = 103/218 (47.25%), Query Frame = 1 Query: 103 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQ--KKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP--RPSRILTPRNLK 693 V+F E FD G + WV S KKD+ G W K N P D+G+ + +AISA + F DK L+ Q+ V + +DCGG Y+KLL+ D + F T Y IMFGPD CG K+H I + + +E + TD+ TH+YT ++ PD + +L+D GSL D++PP P I P + K Sbjct: 60 VYFAETFDSGRLAGWVLSKAKKDDMDEEISIYDGRWEIEELKENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTDDLILENFYDKTSYIIMFGPDKCG-EDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLE--DVVPPIKPPKEIEDPNDKK 274
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 67/211 (31.75%), Postives = 106/211 (50.24%), Query Frame = 1 Query: 115 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN--------DKGIQTSEDYRFYAISAEFPEFSNK-DKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVPCETDQL-----THVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPP--RPSRILTPRNLK 693 E+F W RW+ S K+ N E +Y G+W + + + G+ ++ +AIS EF E N+ +K LV Q+ V E+ L+CGG Y+KLL+ E + Y IMFGPD CG + +VH I + T + +K + L T++YT I++PD + + I+ + GSL+ +D +PP P I P ++K Sbjct: 44 EQFQGAWSERWIPSHAKRFVNGIEEMSYV-GEWTVEESSGPGALKGEAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLLA-EPTHGEMSNSIDYRIMFGPDKCGVN-DRVHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVVRQGSLF--YDFIPPVLPPVEIYDPEDIK 249
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 68/202 (33.66%), Postives = 95/202 (47.03%), Query Frame = 1 Query: 145 WVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEF-PEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTY----NGTNKLIKKEVPCE------TDQLTHVYTFILRPDAPYSILIDNVEKQSGSLYSDWDLLPPRPSRILTPRNLK 693 W+ S KKD+ + GEW+ A D G+ R +AI+A+ F+ T V Q+ +K E+ +CGGGY+KLLS E D F T Y+IMFGPD CG +T KVH I Y NGT P D TH++T +++P YS+ +D G++ SD P +I +LK Sbjct: 75 WIKSLAKKDDVDSDIAKYNGEWSIGAPTKVSIEGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLK 275
BLAST of FC876315 vs. ExPASy Swiss-Prot
Match: CALR_PIG (Calreticulin (Fragment) OS=Sus scrofa GN=CALR PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 103 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDC 357 ++F+E+F DGW RW+ S K D G + ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DC Sbjct: 21 IYFKEQFLDGDGWTDRWIESKHKPD---FGRFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDC 105 The following BLAST results are available for this feature:
BLAST of FC876315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876315 ID=FC876315; Name=FC876315; organism=Citrus clementina; type=EST; length=694bpback to top |