FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 2.417e-45
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGV 579
            +G +FK+ DLS A FGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDHA AA+               VFAWKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  G+
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGM 168          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_SCHPO (Adenosylhomocysteinase OS=Schizosaccharomyces pombe GN=SPBC8D2.18c PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.157e-45
Identity = 90/139 (64.75%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHE 573
            + +KV D+S AAFGR E+E+AE EMPGL+A R ++  SQP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNI+STQDHA AAIA     VFAWKGET +EY WC E+ L   P G P ++I+DDGGD T L+HE
Sbjct:    4 QNYKVADISLAAFGRKELEIAENEMPGLIAVREKYAKSQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYSTQDHAAAAIAATGVPVFAWKGETEEEYLWCIEQQLKSFPSGKPLNMILDDGGDLTALVHE 142          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.157e-45
Identity = 89/142 (62.68%), Postives = 106/142 (74.65%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            ++ V D+  A FGR E+ +AE EMPGL+A R ++G  +P KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDHA AAIA     VFA KGETL EYW  T + L+WG GG P++I+DDGGDAT L+  G  AE
Sbjct:   16 QYVVADIDLADFGRKELSIAETEMPGLIALRIKYGSEKPLKGARIAGSLHMTIQTGVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFATKGETLDEYWAYTHRILEWGDGGTPNMILDDGGDATGLVMLGSKAE 157          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.157e-45
Identity = 95/150 (63.33%), Postives = 110/150 (73.33%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEEILREDGQV 615
            + VKD+  A +GR EI +AE EMPGLMA R E+  ++P  GA+ITGSLHMTIQTAVLIETL  LGA++RW SCNI+STQDHA AAIA     VFA+KGETL+EYW  T KAL +    GP LIVDDGGDATLLIH GV  E      G+V
Sbjct:   10 YVVKDMGLAEWGRREIRMAEAEMPGLMAIREEYRGTKPLAGARITGSLHMTIQTAVLIETLAELGADLRWASCNIYSTQDHAAAAIAATGVPVFAYKGETLEEYWEYTFKALAYEE--GPQLIVDDGGDATLLIHRGVERERAYARTGKV 157          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_DELAS (Adenosylhomocysteinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.123e-45
Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  172 VKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGG----GPDLIVDDGGDATLLIHEGV*AEEIL 597
            + D+S AA+GR EI +AE EMPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGE+L +YW  T +  ++G  G    GP++I+DDGGDAT+L+H G+ AE+ L
Sbjct:   14 IADISLAAWGRKEILIAETEMPGLMATREEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGAEVRWASCNIFSTQDHAAAAIAETGTPVFAIKGESLADYWDYTHRIFEFGAAGTEGEGPNMILDDGGDATMLLHLGMRAEKDL 159          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_CAEEL (Adenosylhomocysteinase OS=Caenorhabditis elegans GN=ahcy-1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.123e-45
Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  A FGR EI LAE EMPGLMA R+++GPSQP KGA+I G LHMTIQTAVLIETLTALGAEV+W SCNIFSTQDHA AAIA+    V+AWKGET +EY WC E+ + +  G   ++I+DDGGD T L+H
Sbjct:    8 YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPLNMILDDGGDLTNLVH 142          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.385e-45
Identity = 93/155 (60.00%), Postives = 110/155 (70.97%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDW-----GPGGGPDLIVDDGGDATLLIHEG 576
            +G EFKV DLS A +GR +IEL+E EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETL ALGAEVRW SCNIFSTQDHA AA+               VFAWKGETL+EYWW  E+AL W     G     ++I+DDGGDAT+L+  G
Sbjct:   14 NGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVFAWKGETLEEYWWAAEQALTWPPLADGTEAPANMILDDGGDATMLVLRG 168          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.185e-45
Identity = 89/146 (60.96%), Postives = 109/146 (74.66%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            A+ + + VKD+S A +GR+E ++AE+EMPGLMA R E+  SQP KGA+I GSLHMT+QTA+LIETLTALGAEVRW SCNIFSTQDHA AAIA     VFA KGETL+EYW   +    W  G   ++I+DDGGDAT+ +  G  AE
Sbjct:    5 AADKPYIVKDMSLAKWGRIEFDMAEIEMPGLMALREEYKDSQPLKGARIAGSLHMTVQTAILIETLTALGAEVRWASCNIFSTQDHAAAAIAETGVPVFATKGETLEEYWDYADAIFHWPDGETANMILDDGGDATMYLILGEKAE 150          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_XANCP (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.200e-44
Identity = 90/151 (59.60%), Postives = 111/151 (73.51%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEG 576
            +V K+    ++K+ D+S A +GR E+++AE EMPGLM+ R +   ++P K  +ITGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDHA AAIA     VFAWKGETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G
Sbjct:    3 AVAKTVPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKG 153          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_XANC8 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.200e-44
Identity = 90/151 (59.60%), Postives = 111/151 (73.51%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEG 576
            +V K+    ++K+ D+S A +GR E+++AE EMPGLM+ R +   ++P K  +ITGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDHA AAIA     VFAWKGETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G
Sbjct:    3 AVAKTVPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKG 153          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_MYCBO2.417e-4559.87Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_SCHPO3.157e-4564.75Adenosylhomocysteinase OS=Schizosaccharomyces pomb... [more]
SAHH_PROMM3.157e-4562.68Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PELCD3.157e-4563.33Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_DELAS4.123e-4563.70Adenosylhomocysteinase OS=Delftia acidovorans (str... [more]
SAHH_CAEEL4.123e-4565.93Adenosylhomocysteinase OS=Caenorhabditis elegans G... [more]
SAHH_MYCPA5.385e-4560.00Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_MARMM9.185e-4560.96Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_XANCP1.200e-4459.60Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANC81.200e-4459.60Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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