FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_CHLPD (Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.239e-49
Identity = 94/137 (68.61%), Postives = 109/137 (79.56%), Query Frame = 1
Query:  166 FKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEG 576
            +KV D+S A +GR EI++AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDHA AAIA+    VFAWKGETL EYWWCT + L++  G GP LIVDDGGDATL+IH G
Sbjct:   10 YKVADMSLAEWGRKEIDIAEKEMPGLMATRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAKAGIPVFAWKGETLDEYWWCTRQILEFEGGKGPHLIVDDGGDATLMIHLG 146          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.604e-49
Identity = 91/147 (61.90%), Postives = 117/147 (79.59%), Query Frame = 1
Query:  169 KVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIAR-DSASVFAWKGETLQEYWWCTEKALDWGPGG-GPDLIVDDGGDATLLIHEGV*AEEILRE 603
            K+KDLS A FG+L++E++E EMPGLM  R E+   +P KGAKITG LHMTI+TA+L+ETL  LGA++RWCSCNI+ST D+A AA++  ++ SVFAW+GETL+EYWWC EKAL WG  G GPDLIVDDG DA+ L+H+G   E++  E
Sbjct:    7 KIKDLSLAPFGKLQMEISETEMPGLMTIREEYEKLKPLKGAKITGCLHMTIETALLMETLQKLGAKLRWCSCNIYSTLDYAAAAVSTLENVSVFAWRGETLEEYWWCVEKALTWGENGEGPDLIVDDGADASYLVHKGAEYEKLYEE 153          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.707e-49
Identity = 94/138 (68.12%), Postives = 109/138 (78.99%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEG 576
            ++KV D+S A +GR EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDHA AAIA     VFAWKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G
Sbjct:    9 DYKVADISLAEWGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHFG 146          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.707e-49
Identity = 94/138 (68.12%), Postives = 109/138 (78.99%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEG 576
            ++KV D+S A +GR EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDHA AAIA     VFAWKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G
Sbjct:    9 DYKVADISLAEWGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHLG 146          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.028e-49
Identity = 95/142 (66.90%), Postives = 110/142 (77.46%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            ++ VKD+S A FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDHA AAIA     VFA KGETL +YW  T K  DW  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    9 DYIVKDISLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLADYWDYTAKLFDWHGGGHPNMILDDGGDATMYVHLGLRAE 150          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.049e-48
Identity = 95/147 (64.63%), Postives = 113/147 (76.87%), Query Frame = 1
Query:  148 SASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +A   ++ VKD+  A FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETLTALGA+VRW SCNI+STQDHA AAIA     VFA KGE+L++YW  T +  DW  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLTALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAE 148          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.049e-48
Identity = 95/142 (66.90%), Postives = 109/142 (76.76%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            ++ VKD+S A FGR E+ LAE EMPGLMA R EFGP QP KGA+I GSLHMTIQT VLIETL ALGA++RW SCNI+STQDHA AAIA     VFA KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    9 DYIVKDISLADFGRKELSLAETEMPGLMATREEFGPKQPLKGARIAGSLHMTIQTGVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFDWHGGGHPNMILDDGGDATMYVHLGLRAE 150          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_SINMW (Adenosylhomocysteinase OS=Sinorhizobium medicae (strain WSM419) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.369e-48
Identity = 96/146 (65.75%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            ++ +++ V D+  A FGR EI +AE EMPGLMACR EFG S+P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGETL+EYW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    2 SANQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.369e-48
Identity = 94/149 (63.09%), Postives = 116/149 (77.85%), Query Frame = 1
Query:  169 KVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDS-ASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE---EILRE 603
            KV D++ A FG  E++L+E E+PGLM     +G S+P KG ++TGSLHMTIQTA+LI+TL  LGA++RW SCNIFSTQDHA AAIA    A VFAWKGETL++YWWCTE AL W  G GPDL+VDDGGDATL+IH+GV  E   E+L++
Sbjct:   17 KVADMALADFGHKEMQLSEREVPGLMELIRMYGVSKPLKGLRVTGSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLLVDDGGDATLMIHKGVEVENNPELLKQ 165          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.369e-48
Identity = 94/139 (67.63%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLI 567
            A    +KV D+S A +GR EIE+AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LGA VRW SCNIFSTQDHA AAIA+    VFAWKGETL EYWWCT + L++  G GP+LIVDDGGDATL+I
Sbjct:    5 AEALAYKVADISLAEWGRKEIEIAEKEMPGLMALRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVDLGANVRWASCNIFSTQDHAAAAIAQAGVPVFAWKGETLDEYWWCTRQILEFDGGLGPNLIVDDGGDATLMI 143          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_CHLPD1.239e-4968.61Adenosylhomocysteinase OS=Chlorobium phaeobacteroi... [more]
SAHH_PLACH3.604e-4961.90Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]
SAHH_CHLTE4.707e-4968.12Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_CHLP84.707e-4968.12Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_BRASB8.028e-4966.90Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_RHOPS1.049e-4864.63Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_BRAJA1.049e-4866.90Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_SINMW1.369e-4865.75Adenosylhomocysteinase OS=Sinorhizobium medicae (s... [more]
SAHH_DESVM1.369e-4863.09Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_CHLCH1.369e-4867.63Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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