FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.788e-48
Identity = 95/146 (65.07%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            A   ++ VKD+  A +GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDHA AAIA     VFA KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.788e-48
Identity = 95/146 (65.07%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            A   ++ VKD+  A +GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDHA AAIA     VFA KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.788e-48
Identity = 95/146 (65.07%), Postives = 115/146 (78.77%), Query Frame = 1
Query:  151 ASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            A+ +++ VKD+S A +GR EI +AE EMPGLMA R EFGPSQP KGA+I GSLHMTIQTAVLI+TL ALGA+VRW SCNI+STQDHA AAIA    +VFA+KGETL+EYW  T++   W  G GP+LI+DDGGDAT+ +  G  AE
Sbjct:    5 AAPQDYFVKDISLAEYGRKEIAIAETEMPGLMAAREEFGPSQPLKGARICGSLHMTIQTAVLIQTLEALGAQVRWVSCNIYSTQDHAAAAIADAGTAVFAYKGETLEEYWDYTDRMFQWPDGEGPNLILDDGGDATMYLILGEKAE 150          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.336e-48
Identity = 96/143 (67.13%), Postives = 109/143 (76.22%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +++ V D+  A FGR EI +AE EMPGLMACR EFG S+P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA KGETL+EYW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    5 QDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_PROVI (Adenosylhomocysteinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.336e-48
Identity = 91/140 (65.00%), Postives = 113/140 (80.71%), Query Frame = 1
Query:  148 SASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLI 567
            +A+  ++KV D+S A +GR EI++AE EMPGLMA R ++   +P  G++I+GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDHA AAIA     VFAWKGE+L+EYWWCT + LD+G G GP+LIVDDGGDAT++I
Sbjct:    4 AATALDYKVADISLAEWGRKEIDIAEKEMPGLMAIRNKYKGQKPLAGSRISGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAVTGVPVFAWKGESLEEYWWCTRQILDFGNGLGPNLIVDDGGDATMMI 143          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.336e-48
Identity = 96/147 (65.31%), Postives = 110/147 (74.83%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 573
            +S      G  +KVKDLSQA +GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFSTQDHA AAIA+    VFAWKGET +EYWWC E+ L +G   GP++I+DDGGD T  +HE
Sbjct:    1 MSATTQEKGLNYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGVPVFAWKGETEEEYWWCIEQTLFFG-DKGPNMILDDGGDLTAYVHE 146          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.336e-48
Identity = 96/147 (65.31%), Postives = 110/147 (74.83%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 573
            +S      G  +KVKDLSQA +GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFSTQDHA AAIA+    VFAWKGET +EYWWC E+ L +G   GP++I+DDGGD T  +HE
Sbjct:    1 MSATTQEKGLNYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGVPVFAWKGETEEEYWWCIEQTLFFG-DKGPNMILDDGGDLTAYVHE 146          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_SOLUE (Adenosylhomocysteinase OS=Solibacter usitatus (strain Ellin6076) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.051e-48
Identity = 93/141 (65.96%), Postives = 107/141 (75.89%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEG 576
            S   FKV DLS A +GR EI ++E EMPGLMA R ++   +P  G +ITGSLHMTIQTAVLIETL  LGA VRW SCNIFSTQDHA AAIA+    VFAWKGE+L+EYWWCT +A+    G GP L+VDDGGD TLLIH+G
Sbjct:    9 SDATFKVADLSLAEWGRKEISVSEFEMPGLMAIRRKYAKEKPLAGVRITGSLHMTIQTAVLIETLVDLGASVRWASCNIFSTQDHAAAAIAKAGVPVFAWKGESLEEYWWCTLQAVTHPGGKGPQLVVDDGGDVTLLIHKG 149          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.984e-48
Identity = 94/147 (63.95%), Postives = 112/147 (76.19%), Query Frame = 1
Query:  148 SASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +A   ++ VKD+  A FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNI+STQDHA AAIA     VFA KGE+L++YW  T +  DW  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAE 148          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.984e-48
Identity = 94/145 (64.83%), Postives = 111/145 (76.55%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            S +++ V+D+  A FGR EI +AE EMPGLMA RAE+  SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDHA AAIA     VFA KGETL EYW  T +  DW  GG P++I+DDGGDAT+ +H G+ AE
Sbjct:    3 SNQDYIVRDIGLADFGRKEIAIAETEMPGLMAVRAEYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTARLFDWHDGGMPNMILDDGGDATMFVHAGLRAE 147          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_METEP1.788e-4865.07Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC41.788e-4865.07Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_HYPNA1.788e-4865.07Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]
SAHH_RHIME2.336e-4867.13Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_PROVI2.336e-4865.00Adenosylhomocysteinase OS=Prosthecochloris vibriof... [more]
SAHH_LEPBL2.336e-4865.31Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ2.336e-4865.31Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_SOLUE3.051e-4865.96Adenosylhomocysteinase OS=Solibacter usitatus (str... [more]
SAHH_RHOP23.984e-4863.95Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_METS43.984e-4864.83Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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