FC876317

Overview
NameFC876317
Unique NameFC876317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFA (Adenosylhomocysteinase OS=Xylella fastidiosa GN=ahcY PE=3 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 2.855e-46
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEG 576
            +++    +K+ D+S   +GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDHA AAIA     VFAWKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G
Sbjct:    6 QTSPNTHYKIADISLTDWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLSDGTLTGPELIVDDGGDATLLIHKG 153          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_VARPS (Adenosylhomocysteinase OS=Variovorax paradoxus (strain S110) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.855e-46
Identity = 97/146 (66.44%), Postives = 112/146 (76.71%), Query Frame = 1
Query:  172 VKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGV*AEEIL 597
            + DLS AA+GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA VRW SCNIFSTQDHA AAIA     VFA KGE+L++YW  T    D+GP    G GP++I+DDGGDATLL+H G  AE+ L
Sbjct:   17 IADLSLAAWGRKEIKIAETEMPGLMAIREEFSKAQPLKGARITGSLHMTIQTAVLIETLQALGATVRWASCNIFSTQDHAAAAIAAAGTPVFAIKGESLKDYWDYTHAIFDFGPKGSQGEGPNMILDDGGDATLLMHLGQRAEKDL 162          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.855e-46
Identity = 94/152 (61.84%), Postives = 111/152 (73.03%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGV 579
            +G +FKV DLS A FGR E++LAE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDHA AA+               VFAWKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  GV
Sbjct:   14 NGIDFKVADLSLANFGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPYGTPEEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPVNMILDDGGDATMLVLRGV 165          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.855e-46
Identity = 94/152 (61.84%), Postives = 111/152 (73.03%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGV 579
            +G +FKV DLS A FGR E++LAE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDHA AA+               VFAWKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  GV
Sbjct:   14 NGIDFKVADLSLANFGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPYGTPEEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPVNMILDDGGDATMLVLRGV 165          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.729e-46
Identity = 96/156 (61.54%), Postives = 114/156 (73.08%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGV*AEE 591
            +V K     +  V DLS A +GR EI++AE EMPGLMA R EF  SQP KGA+ITGSLHMTIQTAVL+ETL ALGA+VRW SCNIFSTQDHA AA+      VFA+KGETL +YW  T +  D+G     G GP++I+DDGGDATLL+H G  AE+
Sbjct:    3 AVLKPTPTHDHHVADLSLADWGRKEIKIAETEMPGLMAIRQEFAASQPLKGARITGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALVAAGTPVFAYKGETLTDYWDYTHRIFDFGAKGTDGEGPNMILDDGGDATLLMHLGQKAEK 158          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_GEOSL (Adenosylhomocysteinase OS=Geobacter sulfurreducens GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.729e-46
Identity = 89/143 (62.24%), Postives = 112/143 (78.32%), Query Frame = 1
Query:  163 EFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AEE 591
            ++ + D+S AA+GR E+ +AE EMPGLMA R E+  ++P +GA+I GSLHMTIQTA+LIETL ALGAEVRW SCNIFSTQDHA AAIA     VFA+KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G  AE+
Sbjct:   15 DYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEK 157          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_AGRT5 (Adenosylhomocysteinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.729e-46
Identity = 91/143 (63.64%), Postives = 109/143 (76.22%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +++ V D++ AAFGR E+++AE EMPGLM+CR EFG S+P KGA+ITGSLHMTIQT VLIETL  LGAE+RW SCNIFSTQDHA AAIA     VFA KGE+L EYW  T+K   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    5 KDYIVADINLAAFGRKELDIAETEMPGLMSCRKEFGESKPLKGARITGSLHMTIQTGVLIETLKELGAEIRWASCNIFSTQDHAAAAIAAAGIPVFAVKGESLTEYWEYTDKIFQWTDGGLSNMILDDGGDATMYILLGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_RHILO (Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.871e-46
Identity = 89/143 (62.24%), Postives = 110/143 (76.92%), Query Frame = 1
Query:  160 REFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGV*AE 588
            +++ V D+S A +GR E+++AE EMPGLMACR EFG  +P KGA+ITGSLHMTIQTAVLIETL ALGA++RW SCNIFSTQDHA AAIA     VFA KGE+L++YW  T++   W  GG  ++I+DDGGDAT+ I  G  AE
Sbjct:    5 KDYVVADISLAGWGRKELDIAETEMPGLMACREEFGAKKPLKGARITGSLHMTIQTAVLIETLKALGADIRWASCNIFSTQDHAAAAIAEAGIPVFAVKGESLEQYWDYTDRIFQWADGGLSNMILDDGGDATMYILIGARAE 147          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.871e-46
Identity = 91/152 (59.87%), Postives = 111/152 (73.03%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGV 579
            +G +FK+ DLS A FGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDHA AA+               VFAWKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G+
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGM 165          
BLAST of FC876317 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.871e-46
Identity = 91/152 (59.87%), Postives = 111/152 (73.03%), Query Frame = 1
Query:  154 SGREFKVKDLSQAAFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHADAAIA---------RDSASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGV 579
            +G +FK+ DLS A FGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDHA AA+               VFAWKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G+
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGM 165          
The following BLAST results are available for this feature:
BLAST of FC876317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
SAHH_XYLFA2.855e-4661.49Adenosylhomocysteinase OS=Xylella fastidiosa GN=ah... [more]
SAHH_VARPS2.855e-4666.44Adenosylhomocysteinase OS=Variovorax paradoxus (st... [more]
SAHH_MYCLE2.855e-4661.84Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB2.855e-4661.84Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_METPP3.729e-4661.54Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_GEOSL3.729e-4662.24Adenosylhomocysteinase OS=Geobacter sulfurreducens... [more]
SAHH_AGRT53.729e-4663.64Adenosylhomocysteinase OS=Agrobacterium tumefacien... [more]
SAHH_RHILO4.871e-4662.24Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY P... [more]
SAHH_MYCUA4.871e-4659.87Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM4.871e-4659.87Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]

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Properties
Property NameValue
Genbank descriptionC32003C09EF DevOvary1 Citrus clementina cDNA clone C32003C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876317 ID=FC876317; Name=FC876317; organism=Citrus clementina; type=EST; length=620bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTACCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGCCTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGACGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCTAAGCTGAGGAGATCCTACGA
GAAGACGGGCAAGTTGCCCG
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