FC876320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.333e-15 Identity = 50/138 (36.23%), Postives = 75/138 (54.35%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVN 490 +++ INGFGRIGR V R I++ R D+E+VA+ND + ++ ++DSVHG++ D + G P+ V +RNP E+PWA G + +E TG+FT V++SAP A +V GVN Sbjct: 3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAIND-LGQVETNAHLLRFDSVHGRFP--AKVTSGDDWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVN 135
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.274e-15 Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVN 490 +K+ ING+GRIGR V R + R D+E+VA+ND ++ +YD+VHG++ E+ V D + G++ + V RNP E+PW E G + V+E TG+FT VIISAP KD +V GVN Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDIEIVAIND-LGNAATNAHLTQYDTVHGRFPG-EVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLRGGAKKVIISAPGGKDVDATIVYGVN 139
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.969e-15 Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 74 IMGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 511 + K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + V D + G K + V RNP +PW + G + V+E TGVF V+I+AP K D P +VVGVN Y P+ Sbjct: 54 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADLYNPD 200
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 2.969e-15 Identity = 55/147 (37.41%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 89 KIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYKPE 511 ++ INGFGRIGR R L R D +E+V +ND T+D T ++ +YDS+ G K D+ ++ K + RNP +PWAE + V+E+TGVF V+I+AP K + +VVGVN HEYK E Sbjct: 3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGIND---TSDPRTNAHLLRYDSMLG--KLDADISADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQAGAKKVLITAPGKGPNIGTYVVGVNAHEYKHE 144
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.878e-15 Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVN 490 +K+ ING+GRIGR V R + R D+E+VA+ND ++ +YD+VHG++ E+ V D + G++ + V RNP E+PW E G + V+E TG+FT VIISAP KD +V GVN Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAIND-LGNAATNAHLTQYDTVHGRFPG-EVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVN 139
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.878e-15 Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 89 KIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNE 493 K+GINGFGRIGRLV R +L+ + ++++VA+ND + + Y+ K+DS +G + +D +L+ K + V+ + + IPW GAE +VE TG +T V+ISAP+ + V VN+ Sbjct: 3 KVGINGFGRIGRLVLRRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYKVND 135
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.065e-15 Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 89 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPEL 514 +I INGFGRIGR V R +L+RD D+++VAVND + + YD+ G+ + V+ + ++ G + +TV R P +PWAE G + V+E+TG FT V++SAP+ A + GVN Y P+L Sbjct: 3 RIAINGFGRIGRNVLRALLERDSDLDVVAVND-LTEPATLARLLAYDTTSGRLGR-PVTVEGNVLVVDGRR-ITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPDL 143
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.615e-15 Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 2 Query: 83 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM--FVVGVNEHEY 502 KV++ INGFGRIGR R R D +++V +ND T+ T ++ KYDS+ G + + +D T+ K + V RNP E+PW E + VVE+TGVF V+I+AP K + FVVGVN+H Y Sbjct: 80 KVRVAINGFGRIGRNFIRCWAGRTDSNMDVVCIND---TSGVKTASHLLKYDSILGTFDSDVVAGEDSITV--DGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQAGAKKVLITAPGKGEGVGTFVVGVNDHLY 220
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 6.615e-15 Identity = 52/143 (36.36%), Postives = 73/143 (51.05%), Query Frame = 2 Query: 83 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 502 K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + ++K + + K + V RNP +PW E G + V+E TGVF VII+AP K D P +VVGVN Y Sbjct: 61 KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAY 201
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3P_ENTAE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Enterobacter aerogenes GN=gap PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.639e-15 Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 125 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 502 +V R +R D+E+V +ND + +YM YM KYDS HG++ ++VKD ++ G K + V ++P + W E G + V E+TG+F V+++ PSKD PMFV G N Y Sbjct: 1 IVFRAAQKRSDIEIVGIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEIGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFETY 124 The following BLAST results are available for this feature:
BLAST of FC876320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876320 ID=FC876320; Name=FC876320; organism=Citrus clementina; type=EST; length=514bpback to top |