FC876320

Overview
NameFC876320
Unique NameFC876320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOLU (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOLI (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain K12) GN=epd PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOLC (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOL6 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O6 GN=epd PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOL5 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOK1 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOHS (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECODH (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECOBW (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
[Close]
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_ECO8A (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 2 
Query:   86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+                V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
The following BLAST results are available for this feature:
BLAST of FC876320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
E4PD_ECOLU6.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECOLI6.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECOLC6.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECOL66.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECOL56.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECOK16.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECOHS6.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECODH6.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECOBW6.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO8A6.845e-1231.29D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionC32003D02EF DevOvary1 Citrus clementina cDNA clone C32003D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876320 ID=FC876320; Name=FC876320; organism=Citrus clementina; type=EST; length=514bp
GACCACGACTGCTCTCTCTACTCTCTACAACTTTCTTCACCACTCTTTCA
CCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAATC
AACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGAG
GGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCGATT
ACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCAC
CATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGCC
TGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAGA
CTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAGGAT
AAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAGC
CCCCAGCAAGGATGCTCCTATGTTTGTTGTGGGTGTCAATGAGCACGAGT
ACAAACCAGAGCTC
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