FC876320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11 Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHE 499 +K+ INGFGRIGRL R I + +E+VAVND D + ++ KYD++ G++ E++V + + G K + F + ++PW + + V+E TG +T V+ISAP+K +V H+ Sbjct: 3 IKVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVIEGGFRVNG-KEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTNHD 137
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_TOLAT (D-erythrose-4-phosphate dehydrogenase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=epd PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11 Identity = 43/148 (29.05%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 ++I INGFGRIGR V R + + R ++++VA+N+P M ++ KYDS HG++ + V+ ++ +L+ G+ + + + ++PW + G + V++ +GV+ V+ S P S D V+ GVN + + E Sbjct: 3 IRIAINGFGRIGRNVLRALYESGRRAEIKVVAINEPADAAG-MAHLLKYDSTHGRF---DWDVRQERDVLYVGDDAIRLLHQKEISQLPWGDLGVDIVLDCSGVYGKRADGEMHLASGAKKVLFSHPGSSDLDATVIYGVNHQQLQSE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALTY (D-erythrose-4-phosphate dehydrogenase OS=Salmonella typhimurium GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALTI (D-erythrose-4-phosphate dehydrogenase OS=Salmonella typhi GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALSV (D-erythrose-4-phosphate dehydrogenase OS=Salmonella schwarzengrund (strain CVM19633) GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDIVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALPK (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNQEHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALPC (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALPB (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALPA (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNQEHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
BLAST of FC876320 vs. ExPASy Swiss-Prot
Match: E4PD_SALNS (D-erythrose-4-phosphate dehydrogenase OS=Salmonella newport (strain SL254) GN=epd PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 86 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 511 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN+++ + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146 The following BLAST results are available for this feature:
BLAST of FC876320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876320 ID=FC876320; Name=FC876320; organism=Citrus clementina; type=EST; length=514bpback to top |