FC876321

Overview
NameFC876321
Unique NameFC876321
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLG---PMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRL 584
            PPGP   PI+GNL  L     +P Q++  L R +GPLM+L+LG              + +K HD +F  RP     + + Y   DI F PYG  WR +RKI ++ L S K +  + H+RQ+E   L +++ S+   P++L+ +L
Sbjct:   34 PPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKL 177          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21
Identity = 51/156 (32.69%), Postives = 84/156 (53.85%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALRREML 623
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ +++DI F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +  +  PV+L++ L     + L R  L
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVAL 186          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20
Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAQRL 584
            PPGP   P +GNL  L  +P ++   L   +GP++ LR GF             + LKIHD    +RP  +G + I+YN++DI F PYG  W+ +RK+S V LF+ K    +R +R+EE  +L + L        PVNL + L
Sbjct:   29 PPGPPKLPFIGNLHQLQELPPRN---LNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTL 168          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20
Identity = 50/122 (40.98%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRP-PNSGAKHIAYNYQDIV--FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE 518
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP  N   K +AY+ QD +  F P+GP W+ ++K+    L SG+ +D +  VRQ+E
Sbjct:   30 PPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQE 151          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.720e-20
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGA-KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG 554
            PP P P PI+G+L  L P PHQ    L+  +GP+++L LG              +FLK H+  FSNRP N+ A + + Y +QD +F PYGP W+ ++K+    L  G  LD +  VRQ E     + +   G
Sbjct:   32 PPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKG 163          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.720e-20
Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMP-HQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE 560
            PPGP+  P++GN+  + G +P H  +  LA  +GPLM+L+LG              + +K HD NFS+RP    ++ ++YN   IVF  +G  WR LRKI +V L + K +  +R +R+EE+A L + +A+  +E
Sbjct:   44 PPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASE 178          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 2.720e-20
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALRREML 623
            PP P   P++ NL  LG  PH+S+  L+  +GPLM L  G                LK HD  F++RP +     I YN +D+   PYG  WR ++ +  +HLFS K +  +R VRQEE++++   +  + +  +NL++ L     N + R  L
Sbjct:   34 PPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKIRISSSLRINLSEILVNLTNNVICRVAL 187          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.552e-20
Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN 569
            PPGP   PI+GNL  LG + ++S   +++ +GP++ LRLG              + LK HD     RP  +      YN++DI F P+G  WR +RKI+++ LFS K L  +R++R+EE  +L + ++ +  E  N
Sbjct:   29 PPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQN 164          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 3.552e-20
Identity = 49/143 (34.27%), Postives = 76/143 (53.15%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRL 584
            PP P   P++GNL  LGP PH+ +  L+  +GPLM L  G                +K HD  F+NRP +          +DI+F PYG  W+ ++ +  VHL + K +  + ++R+EE+ V+T  L  AS+ +  VNL++ L
Sbjct:   34 PPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLL 176          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.552e-20
Identity = 52/156 (33.33%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALRREML 623
            PP P   P++GNL  L   PH++++ L+  HGPLM LR G                +K HD  F+NRP    A  I+   +D+VF PYG  WR ++ + ++HL S K +      R+EE+ +L   L  AS  +  VNL++ +   V + + + +L
Sbjct:   33 PPSPWRLPVIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITNMVSDIMGKVVL 188          
The following BLAST results are available for this feature:
BLAST of FC876321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
C71D8_SOYBN7.157e-2135.42Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BJ_ARATH7.157e-2132.69Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH1.221e-2037.06Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN1.595e-2040.98Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C93A3_SOYBN2.720e-2037.12Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71DA_SOYBN2.720e-2037.04Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71AO_ARATH2.720e-2033.12Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH3.552e-2035.29Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH3.552e-2034.27Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH3.552e-2033.33Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003D03EF DevOvary1 Citrus clementina cDNA clone C32003D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876321 ID=FC876321; Name=FC876321; organism=Citrus clementina; type=EST; length=624bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGG
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGCTGAACTTGTGCGTTGTGA
ATGCCCTACGGCGGGAGATGCTAG
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