FC876321

Overview
NameFC876321
Unique NameFC876321
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.869e-15
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP-LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM-AVLTRA-LASAGTEPVNLAQRLNLCVVNALRR 614
            P  P   PI+G+L  +G +P+ S+A LA  +GP LM LRLG                L+ +D  FS+RP +  +  I Y   D  F PYG  +R  RK+ +VHL +   +   R  R+EE+   L R   A+A  EPV++++ L+  V N + R
Sbjct:   69 PSPPMKLPIIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCR 222          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.665e-15
Identity = 44/152 (28.95%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVF-RPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNAL 608
            PPGP   PI+GN+  +G  PH S A L++T+GP+M L+ G              + L+ +D   S+R P +  + I ++   +V+  P   RWR+LRK+S+  LFS + ++  + +R+ ++  L   +  +S   E V++++   +  +N +
Sbjct:   39 PPGPPRLPIIGNIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNII 190          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.307e-14
Identity = 43/143 (30.07%), Postives = 69/143 (48.25%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT----EPVNLAQ 578
            PP P   P++GNL  L    H+S+  L+  +GPLM L  G                LK +D   +NRP       I    +D+ F PYG  W+ ++ I   +L S K +  Y+ +R++E+ ++   + +A +     PVNL+Q
Sbjct:   34 PPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQ 176          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.708e-14
Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAQRL 584
            PPGP   P++G+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G K + Y+  DI+F PY   WR +RKI    L S + +  +  +RQ+E++ L    R+ A+AG E V+L +R+
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAG-EAVDLTERI 179          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.474e-14
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQ---EEMAVLTRALASAGTEPVNLAQ 578
            PPGP   P+VGN+  LG  PH+S+A  ++T+GP+M L+LG              + L+ HD   S R  N   +   ++   IV+ P   RWR L+K  + +L S + LD  + +R    EE+  L       G E ++LA+
Sbjct:   39 PPGPPILPLVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERG-EAIDLAR 179          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.107e-13
Identity = 43/152 (28.29%), Postives = 79/152 (51.97%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRP-YGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAQRLNLCVVNAL 608
            PPGP   PI+GN+  +G  PH+S A L++T+GP+M L+LG              + L+ HD   S R P +  + I +    +V+ P    RWR+LR++S   L S + ++  + +R  ++  L   ++ +    E V++++   +  +N +
Sbjct:   39 PPGPPRLPIIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNII 190          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.107e-13
Identity = 46/160 (28.75%), Postives = 77/160 (48.12%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP--LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAV----LTRALASAGTEPVNLAQRLNLCVVNALRREML 623
            P  P   PIVG+L H+GP  H S+  L   +G    ++LR G                ++ HD   ++RP +  +  + YN  D+ F P G  W+  RK+ + HL S K +  +RH R+EE+ +    L  A A + +  V++++ L     + + R +L
Sbjct:   58 PSPPGTLPIVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPSTAVDMSEVLAAYTNDVVSRSVL 217          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.446e-13
Identity = 44/152 (28.95%), Postives = 75/152 (49.34%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVF-RPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNAL 608
            PPGP   PI+GN+  +G  PH S A LA+ +GP+M L+ G              + L+ HD   S R  N   +   +    +++  P   RWRMLRK+S   +FS +  +  + +R +++  L   +  +S   E V++++     V+N +
Sbjct:   39 PPGPPRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNII 190          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.888e-13
Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = 3
Query:  162 PPGPK-PWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRL 584
            PP P    PI+G++  LGP+ HQS   L+  +GPL  L  G              Q L+ ++  F+ R  ++  K + Y    + F PYG  WR ++K+S   L   +++++++H+R +E   L R L++     E VN+ + L
Sbjct:   33 PPSPFFRLPIIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYE-SSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEEL 175          
BLAST of FC876321 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.466e-13
Identity = 41/141 (29.08%), Postives = 73/141 (51.77%), Query Frame = 3
Query:  171 PKPWPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLN 587
            P   P++G+L  L  G  P   +  +AR +GP+ +++LG              Q +K+ D NF++R  + G++ + Y+  DI+F PY   W  +RKI    L S K +  +  +RQEE+  L R +  +   PV++ + ++
Sbjct:   35 PPKLPVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIRVMKQSEGAPVDVTEEVS 175          
The following BLAST results are available for this feature:
BLAST of FC876321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
C71C4_MAIZE5.869e-1535.06Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C76C2_ARATH7.665e-1528.95Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71AJ_ARATH1.307e-1430.07Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI1.708e-1431.72Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C76C3_ARATH8.474e-1433.10Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH1.107e-1328.29Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE1.107e-1328.75Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C76C4_ARATH1.446e-1328.95Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C93B1_GLYEC1.888e-1329.86Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C7D94_MENGR2.466e-1329.08Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionC32003D03EF DevOvary1 Citrus clementina cDNA clone C32003D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876321 ID=FC876321; Name=FC876321; organism=Citrus clementina; type=EST; length=624bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGG
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGCTGAACTTGTGCGTTGTGA
ATGCCCTACGGCGGGAGATGCTAG
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