FC876324

Overview
NameFC876324
Unique NameFC876324
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9430 contig Ccv1_Contig9430:32..581. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_ANAVT (Fructose-1,6-bisphosphatase class 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fbp PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 2 
Query:  230 ATKKRSSYEIETLTNWLLKQEQSGVIDAE-LTIVLSSISTACKQIASLVQRAGI-SNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVPLAVEE 550
            +T K    +  TL+  +L+Q QS   DA+ L+ +++ I+ A K +A  + RAG+   + G  G VNVQGE  KK+DV +N+VF +  + SG    +ASEE D P  + E
Sbjct:   15 STDKALDRDCTTLSRHVLQQLQSFSADAQDLSALMNRIALAGKLVARRLSRAGLMEGVLGFTGEVNVQGESVKKMDVYANDVFISVFKQSGLVCRLASEEMDEPYYIPE 123
[Close]
BLAST of FC876324 vs. ExPASy Swiss-Prot
Match: F16PA_ANASP (Fructose-1,6-bisphosphatase class 1 OS=Anabaena sp. (strain PCC 7120) GN=fbp PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 2 
Query:  230 ATKKRSSYEIETLTNWLLKQEQSGVIDAE-LTIVLSSISTACKQIASLVQRAGI-SNLTGIQGAVNVQGEDQKKLDVASNEVFSNCLRSSGRTGIIASEEEDVPLAVEE 550
            +T K    +  TL+  +L+Q QS   DA+ L+ +++ I+ A K +A  + RAG+   + G  G VNVQGE  KK+DV +N+VF +  + SG    +ASEE D P  + E
Sbjct:   15 STDKALDRDCTTLSRHVLQQLQSFSADAQDLSALMNRIALAGKLVARRLSRAGLMEGVLGFTGEVNVQGESVKKMDVYANDVFISVFKQSGLVCRLASEEMDEPYYIPE 123
The following BLAST results are available for this feature:
BLAST of FC876324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
F16PA_ANAVT8.875e-1138.53Fructose-1,6-bisphosphatase class 1 OS=Anabaena va... [more]
F16PA_ANASP8.875e-1138.53Fructose-1,6-bisphosphatase class 1 OS=Anabaena sp... [more]

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Properties
Property NameValue
Genbank descriptionC32003D06EF DevOvary1 Citrus clementina cDNA clone C32003D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876324 ID=FC876324; Name=FC876324; organism=Citrus clementina; type=EST; length=551bp
GCGTAAAGCAGAAAGCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGC
ATCATCACAGCTTCTCTTTTCAAGCTCTCACTCTTCTCTCTCGGCTCTCT
CCTTACCAAATATGTGTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCC
CAGCAACGTTTTGAAGAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGT
GCATGGCTGTTGGGACAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCG
TATGAGATTGAAACGCTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGG
CGTTATTGATGCTGAGCTCACTATTGTGCTTTCCAGCATTTCAACGGCGT
GCAAGCAGATTGCTTCTTTGGTGCAAAGAGCTGGCATTTCCAACTTGACT
GGAATTCAGGGTGCTGTCAATGTTCAAGGCGAGGACCAGAAGAAGCTCGA
CGTCGCTTCAAATGAGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAA
CCGGGATTATAGCGTCAGAGGAAGAGGATGTACCACTGGCGGTAGAAGAG
A
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