FC876325

Overview
NameFC876325
Unique NameFC876325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11268 contig Ccv1_Contig11268:78..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_MYCMM (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.100e-12
Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRIS--NIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+L+RHGES WN +NLFTG VDV LT+KG  EA+ +G+ ++  ++  D++YTS L RA  TA LA+                   R W            IPV  +W+LNER YG
Sbjct:    7 LVLLRHGESDWNARNLFTGWVDVGLTEKGRAEAVRSGELLAEQDLLPDVLYTSLLRRAITTAHLAL---------------DSADRLW------------IPVRRSWRLNERHYG 94          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRGG (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12
Identity = 47/115 (40.87%), Postives = 61/115 (53.04%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPV--DMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            LIL+RHGES WN KNLFTG VDV LT+KG +EA+  G+ + +  +  D+++TS   RA  TA LA+                   R W            IPV  +W+LNER YG
Sbjct:    8 LILLRHGESEWNAKNLFTGWVDVNLTEKGEKEAVRGGELLKDAGLLPDVLHTSLQRRAIRTAQLAL---------------ESADRLW------------IPVRRSWRLNERHYG 95          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_MYCA1 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Mycobacterium avium (strain 104) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12
Identity = 48/117 (41.03%), Postives = 61/117 (52.14%), Query Frame = 2
Query:  329 AALILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISN--IPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            A L+L+RHGES WN  NLFTG VDV LT KG  EA+ +G+ ++   +  D++YTS L RA  TA LA+                   R W            IPV  +W+LNER YG
Sbjct:    5 ATLVLLRHGESEWNSLNLFTGWVDVGLTDKGRAEAVRSGELLAEQGLLPDVLYTSLLRRAITTAHLAL---------------DAADRLW------------IPVRRSWRLNERHYG 94          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: PMGY_CANAL (Phosphoglycerate mutase OS=Candida albicans GN=GPM1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+LVRHG+S WNEKNLFTG VDV L++ G +EA  AG+ +  + I VD+++TS L RA  TA +A+                       Q++        +PV  +W+LNER YG
Sbjct:    4 LVLVRHGQSEWNEKNLFTGWVDVRLSETGQKEAKRAGELLKEAGINVDVLHTSKLSRAIQTANIALD-------------------AADQLY--------VPVKRSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRZT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIKFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRZP (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain P1031) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIKFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRZJ (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain JJA) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRSV (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus sanguinis (strain SK36) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRR6 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
BLAST of FC876325 vs. ExPASy Swiss-Prot
Match: GPMA_STRPS (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Streptococcus pneumoniae (strain CGSP14) GN=gpmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 2
Query:  335 LILVRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRI--SNIPVDMIYTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARTWSQIFSEDTMKQSIPVVTAWQLNERMYG 673
            L+  RHGES WN+ NLFTG  DV L++KG ++AI+AGK I  + I  D  YTS L RA  T  LA+               S+Q   W            +PV  +W+LNER YG
Sbjct:    4 LVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIKFDQAYTSVLKRAIKTTNLAL-------------EASDQ--LW------------VPVEKSWRLNERHYG 91          
The following BLAST results are available for this feature:
BLAST of FC876325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
GPMA_MYCMM1.100e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRGG1.876e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_MYCA11.876e-1241.032,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
PMGY_CANAL2.451e-1240.00Phosphoglycerate mutase OS=Candida albicans GN=GPM... [more]
GPMA_STRZT2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRZP2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRZJ2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRSV2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRR62.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_STRPS2.451e-1240.872,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionC32003D07EF DevOvary1 Citrus clementina cDNA clone C32003D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876325 ID=FC876325; Name=FC876325; organism=Citrus clementina; type=EST; length=677bp
ATGAAAAAGATATTTCTGATGCTCATATGCTGCTTGAGTTAACACTGATT
GAATGTCTGCACAGGTATTTCACCAAGCTATGGGGACTCTCCAATCCAAT
CGACTTCTTAACACCTCTGGCACTCACCATGAACTTGGAAATATTAGGGT
GCATTTGATTCCAAAAAGTTTCAAGCTTAATATTGAATTGTCAAGAAACA
GGAATTTTAGATTTGGGAAGAAGAATTTTGGCATAATTCAGGCCACAGCT
TCTCAAACTTCAGTTATTGAATCTGCTTCATCTCCCTCAAATCACGACAC
CAGTGACTCCAAAAAGAAATCAAATGAAGCAGCTTTGATACTGGTTCGAC
ATGGTGAGTCTCTCTGGAATGAAAAGAACCTGTTTACAGGTTGTGTTGAT
GTGCCATTAACCAAGAAGGGTGTAGAAGAGGCAATTGAGGCTGGAAAGAG
AATAAGCAACATACCTGTCGACATGATATATACATCAGCACTAATTCGCG
CGCAGATGACTGCTATGCTCGCCATGACACAGCACCGACGCAGGAAGGTG
CCTATCATTATGCATAATGAAAGTGAACAGGCAAGGACCTGGAGTCAGAT
CTTCAGCGAAGACACCATGAAGCAGTCCATTCCCGTTGTAACAGCTTGGC
AATTGAATGAAAGAATGTATGGGGAAT
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