FC876327

Overview
NameFC876327
Unique NameFC876327
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10260 contig Ccv1_Contig10260:6..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 7.651e-96
Identity = 152/182 (83.52%), Postives = 168/182 (92.31%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQL KL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 54.299 bits (129), Expect = 7.651e-96
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 1.302e-95
Identity = 154/182 (84.62%), Postives = 171/182 (93.96%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            MA+++EIR AQRADGPAT+LAIGTATP +++ QADYPDYYFR+TKSEHMTELKEKF+RMCDKSMIKKRYMYLTEEILKENPN+C YM  SLD RQD+VV EVP+LGKEAA KAIKEWGQPKSKITH+I CTTSGVDMPGADYQL KL+GLRPSV+RFM+YQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MASIEEIRQAQRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYMYLTEEILKENPNLCEYMGSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 44.2838 bits (103), Expect = 1.302e-95
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSEITA+ FRGP +  LDS
Sbjct:  182 KGARVLVVCSEITAICFRGPTEAALDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 1.302e-95
Identity = 153/182 (84.07%), Postives = 166/182 (91.21%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M TV+E+R AQRA+GPAT+LAIGT TPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPKSKITH++FCTTSGVDMPGADYQL KL+GL PSVKR MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 51.2174 bits (121), Expect = 1.302e-95
Identity = 22/27 (81.48%), Postives = 26/27 (96.30%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVL+VCSEIT VTFRGP++THLDS
Sbjct:  182 KGARVLIVCSEITVVTFRGPSETHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.302e-95
Identity = 154/183 (84.15%), Postives = 171/183 (93.44%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRA 601
            M TV+E+R AQRA+GPAT+LAIGTATPA+ V+Q+ YPDYYFRIT S+HMT+LK+KF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDIVVVEVPKLGKEAA  AIKEWGQPKSKITH+IFCTTSGVDMPGADYQL KL+GLRPSVKR MMYQQGCFAGGTVLR+AKDLAENN+A
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVDQSTYPDYYFRITNSDHMTDLKQKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIVVVEVPKLGKEAAQSAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRVAKDLAENNKA 183

HSP 2 Score: 48.1358 bits (113), Expect = 1.302e-95
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            + ARVLVVCSEIT VTFRGP +THLDS
Sbjct:  182 KAARVLVVCSEITVVTFRGPNETHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 1.699e-95
Identity = 153/182 (84.07%), Postives = 166/182 (91.21%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M TV+E R AQRA+GPAT+LAIGT+TP++ V+Q+ YPDYYFRIT SEH TELKEKFKRMCDKSMIKKRYM+LTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGK    KAIKEWGQPKSKITHL+FCTTSGVDMP  DYQL KL+ +RPSVKR MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKRGTQKAIKEWGQPKSKITHLVFCTTSGVDMPACDYQLAKLLPVRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 51.6026 bits (122), Expect = 1.699e-95
Identity = 23/27 (85.19%), Postives = 27/27 (100.00%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSEITAVTFRGP+++HLDS
Sbjct:  182 KGARVLVVCSEITAVTFRGPSESHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.699e-95
Identity = 150/182 (82.42%), Postives = 168/182 (92.31%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M +V EIR AQRA+GPAT++AIGTA P++ V Q+ YPD+YF+IT SEH  ELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL KL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 54.299 bits (129), Expect = 1.699e-95
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.699e-95
Identity = 152/182 (83.52%), Postives = 166/182 (91.21%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M +V EIR AQRA+GPAT+LAIGTA P + V QA YPD+YF+IT SEH  ELKEKF+RMCDKSMIK RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL KL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 54.299 bits (129), Expect = 1.699e-95
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 2.216e-95
Identity = 151/182 (82.97%), Postives = 167/182 (91.76%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YFRIT SEH  ELK+KF+RMCDKSMI +RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL KL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 54.299 bits (129), Expect = 2.216e-95
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 2.216e-95
Identity = 151/182 (82.97%), Postives = 167/182 (91.76%), Query Frame = 2 
Query:   53 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            M +V EIR  QRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH T LKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQL KL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:    1 MVSVSEIRKPQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 54.299 bits (129), Expect = 2.216e-95
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSE+TAVTFRGP+DTHLDS
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLDS 208
[Close]
BLAST of FC876327 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 3.771e-95
Identity = 152/179 (84.92%), Postives = 169/179 (94.41%), Query Frame = 2 
Query:   62 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLKKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 598
            V+ IR AQRA+GPAT+LAIGTATPA+ V QADYPDYYFR+T+SEHM +LKEKF+RMCDKSMI+KRYM++TEE LKENP+MC +MAPSLDARQD+VVVEVPKLGKEAATKAIKEWG PKSKITHL+FCTTSGVDMPGADYQL KL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+
Sbjct:   10 VETIRKAQRAEGPATILAIGTATPANCVYQADYPDYYFRVTESEHMVDLKEKFQRMCDKSMIRKRYMHITEEFLKENPSMCKFMAPSLDARQDLVVVEVPKLGKEAATKAIKEWGFPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 188

HSP 2 Score: 49.2914 bits (116), Expect = 3.771e-95
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 1 
Query:  595 QGARVLVVCSEITAVTFRGPADTHLDS 675
            +GARVLVVCSEITAVTFRGP + HLDS
Sbjct:  188 KGARVLVVCSEITAVTFRGPNEGHLDS 214
The following BLAST results are available for this feature:
BLAST of FC876327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS4_MEDSA7.651e-9683.52Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHSY_DIAMO1.302e-9584.62Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHS2_IPOBA1.302e-9584.07Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSD_IPONI1.302e-9584.15Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHS1_SOLLC1.699e-9584.07Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHS3_MEDSA1.699e-9582.42Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS1_TRISU1.699e-9583.52Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS4_PEA2.216e-9582.97Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ... [more]
CHS1_PEA2.216e-9582.97Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHS3_GERHY3.771e-9584.92Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32003D09EF DevOvary1 Citrus clementina cDNA clone C32003D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876327 ID=FC876327; Name=FC876327; organism=Citrus clementina; type=EST; length=675bp
GAAACTCACCAAGCACGAGCCACAAACATATTCATTAAGGGATCAACTTG
AAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCGACGGCCCG
GCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGTGTCAACCA
GGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCATATGA
CGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGATTAAG
AAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAACCCCAACAT
GTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGTGGTGG
TCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCAAAGAA
TGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCACCACCTC
CGGCGTCGACATGCCCGGCGCCGACTACCAGCTCAAGAAACTGATCGGCC
TGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTTTCGCC
GGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAACAGGGC
GCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACTTTCCGCGG
NCCTGCCGATACTCATCTTGATTCT
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