FC876328

Overview
NameFC876328
Unique NameFC876328
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.231e-19
Identity = 52/144 (36.11%), Postives = 75/144 (52.08%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAXRL 584
            PPGP   P +G + HL G +PH+ +  LA  +GPLM+L+LG              Q LK HD  F++RP       I YN +DI F PYG  WR +RKI  + + S K++  +  +R +E+  L  ++    T  E VN   R+
Sbjct:   32 PPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERI 175          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-18
Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP--VNLA 575
            PP P   PI+GNL  LG +PHQS+  L++ +GP+M L+LG              Q LK +D +  +RP   G + ++YNY DI F  +   W+ LRK+    LF  K ++  + +++ EM  L  ++A + ++   VNL+
Sbjct:   31 PPSPPGLPIIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLS 170          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLA 575
            PPGP   PI+GNL  L  + H+ +  L++ HGP+M+LRLGF             + LK HD    +RP    ++  + N +DI F  YG  WR LRK+S    FS K +  ++++R+EE  ++ + L    ++  PV+L+
Sbjct:   33 PPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLS 172          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.128e-18
Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNL 572
            PPGP   PI+GNL  LG  PH+S+  L+  +GPL+YL+LG                LK  D +  +R   +    I+YN +D+ F PY   W+ +RK++ V L++ K +  +R++R+EE+A     +  + +  E VNL
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNL 168          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.335e-18
Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG 554
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP     +++A  +   VF PYGP  + ++K+    L  G+ LD +  VRQ+E     + +   G
Sbjct:   30 PPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP----GQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKG 156          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPM-PHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE 518
            PPGP P P++GNL  L  + P +  AG A+ +GP++  R+G              + LK  D NF++RPP+ G + I+Y  +D+    Y P +R +RK+   HLFS   +  ++HVR+EE
Sbjct:   31 PPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEE 150          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18
Identity = 45/139 (32.37%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNL 572
            PPGP   PI+GN+ +L   P+PH  +  L+  +G LM+L+LG              + +K HD  F++RP    A+ + Y+++ + F PYG  WR LRKI ++ L S K +  ++ +R+E +    + +A+     VN+
Sbjct:   36 PPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNV 174          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18
Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAXRLNLCVVN 602
            PPGPK  PI+GNL     +  ++   LA  +GP+  L+ GF             + LKI+D    +RP  +G +   YN++DI   P+G  W ++RK+S V LFS K L  ++++ +EE  +  + L+   T   PVNL   +   V N
Sbjct:   29 PPGPKKLPIIGNLHQRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGN 177          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18
Identity = 45/141 (31.91%), Postives = 74/141 (52.48%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMA-VLTRALASAGTEPVNLAXRL 584
            P P+  PI+GNL  LG +PH+S+  L++ +GP+M L  G                +K HD  +++RP +S    ++Y  +D+ F P+G  WR  + I+ +HL S   +  YR+VR EE A ++ +      +  +NL   L
Sbjct:   39 PSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHL 179          
BLAST of FC876328 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.189e-17
Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAXRL 584
            PPGP   PIVGNL  L  M H+ +  L++ HGP+M+L+LGF             + LK HD     RP  + A+  + N ++I    Y   WR LRK++    FS K +  +R+VR+EE  ++ + L     +  PV+L+  L
Sbjct:   33 PPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTL 175          
The following BLAST results are available for this feature:
BLAST of FC876328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71D7_SOLCH8.231e-1936.11Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BA_ARATH1.075e-1834.29Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH1.404e-1835.00Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BD_ARATH3.128e-1834.53Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN5.335e-1835.88Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C83A1_ARATH6.968e-1836.67Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71D9_SOYBN6.968e-1832.37Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BF_ARATH6.968e-1833.56Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME9.100e-1831.91Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71BP_ARATH1.189e-1734.97Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003D11EF DevOvary1 Citrus clementina cDNA clone C32003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876328 ID=FC876328; Name=FC876328; organism=Citrus clementina; type=EST; length=604bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCNACGGTTGAACTTGTGCGTTGTGA
ATGC
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