FC876332

Overview
NameFC876332
Unique NameFC876332
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22
Identity = 66/158 (41.77%), Postives = 87/158 (55.06%), Query Frame = 2
Query:  188 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLG----LRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            DL+  E H   +K +  K YA++ E   R  IF  N  + A+  +L      S   G+ +++D+   EF+ T  G    LR+ +R       A  +P   +  P   DWRE GAV  VKDQG CGSCW+FS+TGALEG +F   G LVSLSEQ LVDC
Sbjct:   22 DLIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDC 177          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22
Identity = 63/145 (43.45%), Postives = 82/145 (56.55%), Query Frame = 2
Query:  209 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            HF  +  +  K Y+S EE+  R   F +NLR        + +   G+ QFSD++  E +R YL        P++        +  T   P   DWR+KG  V PVK+QGSCGSCW+FSTTGALE A  +ATGKL  L+EQQLVDC
Sbjct:   34 HFQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSE-----PQNCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDC 172          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22
Identity = 55/146 (37.67%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  212 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAAR-RQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-----PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            F  +  ++ + Y   +E  RRF IFK N++       + + S T G+ QF+D+T +EF   Y G+     LP + ++ P++  +D+     P   DWR+ GAV  VK+Q  CGSCWSF+    +EG   + TG LVSLSEQ+++DC
Sbjct:   37 FEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVS----LPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDC 178          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = 2
Query:  188 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 634
            DLL A ++F  F  +FNK Y S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   ++         +  P    P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQ++DCD
Sbjct:   20 DLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD 168          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 2
Query:  188 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 634
            D+L A ++F  F +++NK Y S+ E  RR+ IF+ NL     + + D +A + + +FSDL+  E    Y GL   L      +   +  P    P +FDWR    +  VK+QG CG+CW+F+T  +LE    +A  +L++LSEQQ++DCD
Sbjct:   20 DILKAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND-TAVYKINKFSDLSKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD 168          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 2
Query:  173 ESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 634
            +S   D L A ++F  F  +FNK Y+S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL    +         +  P    P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQ++DCD
Sbjct:   15 KSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD 168          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21
Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 2
Query:  188 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 679
            DLL A  +F  F   +NK Y    E +RRF+IF+  L     + +L+ SA + + +F+DL+  E    Y GL   ++         I  P    P +FDWR++  V  +K+Q +CG+CW+F+T  ++E    +     + LSEQQ++DCD+         CD G+
Sbjct:   23 DLLKAGDYFETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY-----VDMGCDGGL 182          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21
Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 2
Query:  332 SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 676
            S T  +  F D+T  EFR+   G + +        Q  +LP  ++P   DWREKG + PVKDQG CGSCW+FS TGALEG  F  TGKL+SL+EQ LVDC     P+    C+ G
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLP--EIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCS---GPQGNEGCNGG 124          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 2
Query:  212 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD-FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDC 631
            F+ + +   + Y+S EE + R+ IFK+N+    +          G+  F+D+T  E+R TYLG           ++  I  T   PA   DWR +GAV P+K+QG CG CWSFSTTG+ EGA+F+A+G    LVSLSEQ L+DC
Sbjct:   30 FTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEEKIFST---PAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDC 169          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 2
Query:  212 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 640
            F  +  K  K Y S  E +RR TIF+ NLR    R   + S   G+ +F+DL+  E+     G   R  R       +    T+D   LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE 202          
The following BLAST results are available for this feature:
BLAST of FC876332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CATL_SARPE4.495e-2241.77Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATH_BOVIN5.871e-2243.45Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
BROM1_ANACO5.871e-2237.67Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATV_NPVRO7.668e-2238.67Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVEP7.668e-2236.67Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATV_NPVBM7.668e-2238.06Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATV_NPVBS1.001e-2132.73Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATL6_HUMAN1.001e-2146.96Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CYSP4_DICDI1.308e-2141.67Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CPR4_ARATH2.231e-2142.18Probable cysteine proteinase At4g11320 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC32003E03EF DevOvary1 Citrus clementina cDNA clone C32003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876332 ID=FC876332; Name=FC876332; organism=Citrus clementina; type=EST; length=680bp
GACGCTTCTATTGATATCAGCATTGTCTAAAAACATGGGATCTAAAACAG
TAGTTTTCTTTCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGG
ACGTTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGACGGCGG
TGACGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTTGGGCG
CAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGTACGCT
TCGCAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAACTTGCG
ACGCGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGGCGTCA
CTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGC
CTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTT
GCCTACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTG
TAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGT
ACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGT
GAGCCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTG
AGGAACCAGGTTCTTGTGATTCTGGGATGC
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