FC876332

Overview
NameFC876332
Unique NameFC876332
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11876 contig Ccv1_Contig11876:65..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 57/158 (36.08%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  173 ESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRR--AARRQKLD-PSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 634
            E    +L  A  +F  F + +NK Y S  E ++R++IFK NL    A      D P+AT+ + +FSDL+ +E    + GL    R+        +  P +  P  FDWRE+  V  +K+QG+CG+CW+F+T  ++E    +   +L+ LSEQQL+DCD
Sbjct:   43 EGAAYNLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD 200          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 59/147 (40.14%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  203 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            +HH+ L+KK + K Y  + E   R  I++ NL+             H    G+    D+T  E       LR   + P++       P   LP   DWREKG V  VK QG+CGSCW+FS  GALE    L TGKLVSLS Q LVDC
Sbjct:   25 DHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSD-PNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDC 170          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21
Identity = 59/145 (40.69%), Postives = 77/145 (53.10%), Query Frame = 2
Query:  209 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHG----VTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            H+  +K    + Y   EE  RR  +++ N +      +      HG    +  F D+T  EFR+   G + +          P+L   D+P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC
Sbjct:   28 HWHQWKATHRRLYGMNEEEWRR-AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21
Identity = 59/145 (40.69%), Postives = 77/145 (53.10%), Query Frame = 2
Query:  209 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHG----VTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            H+  +K    + Y   EE  RR  +++ N +      +      HG    +  F D+T  EFR+   G + +          P+L   D+P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC
Sbjct:   28 HWHQWKATHRRLYGMNEEEWRR-AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 2
Query:  209 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            HF  + K+  K Y+S E ++ R  +F  N R+     + + +    + QFSD++ AE +  +L        P++        +  T   P+  DWR+KG  V PVK+QG+C SCW+FSTTGALE A  +A+GK++SL+EQQLVDC
Sbjct:   32 HFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDC 170          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.806e-21
Identity = 61/153 (39.87%), Postives = 79/153 (51.63%), Query Frame = 2
Query:  203 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 640
            +HH++L+KK ++K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVDC  E
Sbjct:   25 DHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEV----ISLMGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTE 173          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.806e-21
Identity = 62/158 (39.24%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  221 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 679
            +K    + Y   EE  RR  +++ N++      +      HG +     F D+T  EFR+   G + +K +  K   ++ +L   ++P   DWREKG V  VK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+    C+ G+
Sbjct:   32 WKATHGRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVL---EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQGNQGCNGGL 182          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 66/159 (41.51%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  188 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLG----LRRKLRLPKDADQAP--ILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 631
            D++  E H   FK +  K Y  + E   R  IF  N  + A+  +       S    V +++DL   EFR+   G    L ++LR   ++ +    I P +  LP   DWR KGAV  VKDQG CGSCW+FS+TGALEG +F  +G LVSLSEQ LVDC
Sbjct:   53 DVVMEEWH--TFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDC 209          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 65/157 (41.40%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  221 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 676
            +K    + Y + EE  RR  +++ N++             HG T     F D+T  EFR+     R +K R  K   +   L   DLP   DWR+KG V PVK+Q  CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+    C+ G
Sbjct:   32 WKATHRRLYGANEEGWRR-AVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFL---DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQGNQGCNGG 181          
BLAST of FC876332 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 60/153 (39.22%), Postives = 78/153 (50.98%), Query Frame = 2
Query:  203 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 640
            +HH++L+KK + K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVDC  +
Sbjct:   25 DHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEV----MSLMSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEK 173          
The following BLAST results are available for this feature:
BLAST of FC876332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CATV_NPVLD2.231e-2136.08Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATS_BOVIN2.231e-2140.14Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL2_BOVIN2.914e-2140.69Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_BOVIN2.914e-2140.69Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATH_MOUSE2.914e-2139.31Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATS_CANFA3.806e-2139.87Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL1_PIG3.806e-2139.24Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL_DROME8.478e-2141.51Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATL2_HUMAN8.478e-2141.40Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATS_SAIBB1.107e-2039.22Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32003E03EF DevOvary1 Citrus clementina cDNA clone C32003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876332 ID=FC876332; Name=FC876332; organism=Citrus clementina; type=EST; length=680bp
GACGCTTCTATTGATATCAGCATTGTCTAAAAACATGGGATCTAAAACAG
TAGTTTTCTTTCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGG
ACGTTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGACGGCGG
TGACGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTTGGGCG
CAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGTACGCT
TCGCAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAACTTGCG
ACGCGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGGCGTCA
CTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACCTTGGC
CTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCGATCTT
GCCTACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTG
TAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGT
ACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGT
GAGCCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTG
AGGAACCAGGTTCTTGTGATTCTGGGATGC
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