FC876335

Overview
NameFC876335
Unique NameFC876335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC876335 vs. ExPASy Swiss-Prot
Match: DI192_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana GN=DI19-2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 3 
Query:  324 CPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHITMQHGNFFKIQRKRRLRRGGPNSTFSLLRKEL 554
            CPFCA D+D+V LC HIDE+H  EA NG+CPVC+KRV   +V HIT  H +  K ++K    R  P  +   L+  L
Sbjct:   49 CPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHHRDVLKSEQKEMSYREDPYLSDKYLQPHL 125
The following BLAST results are available for this feature:
BLAST of FC876335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DI192_ARATH5.652e-1548.05Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC32003E07EF DevOvary1 Citrus clementina cDNA clone C32003E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876335 ID=FC876335; Name=FC876335; organism=Citrus clementina; type=EST; length=701bp
GGCAGCGGAAGTTCGGTGGAAGGAGAGTTTTGTGTTGTGTTGTGTTGCTT
CCTTGGCCTTTCACATCTCATTTGTCTTGGGGGGTTTTGTTTATTAAGAT
CTTTACAATTAAGTCGACAATTTCAAACGAATTTACACGATTGCCACCAC
CACCGTAAAAATCGTTACTTTCTTACACGAAAAAAATGGAGTCGAATTTG
TGGAGCAATCGCCTCTCAACGGCTTCTTCAAGACGCTACCACCACCAGTC
TCGATCTGATCTGTTCATCGGAGGAGGATACGATGAAACGGACGGCGACG
ATGATTTGAATGCGATGTTTCTTTGCCCATTTTGTGCTGAAGATTTCGAC
ATTGTTGGACTTTGTTGCCACATCGATGAGGATCATCCGATTGAAGCTAA
AAACGGGGTATGCCCTGTTTGTGCGAAGAGAGTTGGAACAGATATTGTTA
GCCACATAACCATGCAGCATGGGAATTTTTTTAAAATTCAGCGCAAACGG
AGATTGCGTAGGGGTGGACCAAATTCGACATTTTCTTTACTGAGAAAAGA
ATTACGAGATGGAAACCTACAATCTCTTCTTGGGGGATCTTCATGCTTTG
TTTCTTCCTCCAATACAGAGGCTGATCCATTGTTGTCGTCATTTATATTT
AACACGCCTAAGGNTGATGAACCTCTTAGTGTGCAACCACTTTCGATTAC
T
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