FC876338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14 Identity = 47/145 (32.41%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTP----AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVY 578 +A +AEF + ++F++ + + + TD A G++ + A +FV V A ISGGH+NPAVT G F+ ++L+R++LY +AQ LG++ C +K T A L+ G + + EI+ TF LVY Sbjct: 39 RAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVY 183
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14 Identity = 51/139 (36.69%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALS---SGVSSWNAVVFEIVMTFGLV 575 +A AEFF+ + +VF G G+ + + A P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+ Y AQLLG+V +L T AL+ +GVS A EI +T V Sbjct: 11 RAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFV 142
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14 Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLV 575 +A AEFF+ + +VF G G+ + + T G P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+ Y AQLLG+V +L T AL++ GVS A EI +T V Sbjct: 11 RAIFAEFFATLFYVFFGLGASLRW---TPG----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATTVEIFLTLQFV 142
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14 Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVSSWNAVVFEIVMTFGLV 575 +A LAEF + ++FVF G GS + + AS+P ++ ++A + V ++SG H+NPAVT VG H++ LR+ Y AQLLG+V +L T G L + AL + ++ AV E+ +T LV Sbjct: 11 RAVLAEFLATLLFVFFGLGSALQW-------ASSPPSVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVN--ALHNNATAGQAVTVELFLTMQLV 142
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.476e-14 Identity = 47/142 (33.10%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAF-SKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSV----VACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +A +AEF + +IF++ + + + ++ A T G + + + +FV V +SGGH+NPAVT G F G ++L+R++LY +AQ LG++ + ++K L A +S G S+ A+ EIV TF LVY Sbjct: 44 RALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVY 185
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.476e-14 Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGS--GMAFSKLTDGGASTPAGLISASLAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVY 578 +A +AEF + ++F++ + G TD G G+ +A AF +F+ V A ISGGH+NPAVTFG F+ ++L R++LY IAQ LG++ +K T A +L+ G S+ + EI+ TF LVY Sbjct: 39 RAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVY 183
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13 Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLV 575 +A AEFF + +VF G G+ + + A+ PA ++ +LA L V ++SG H+NPAVTF +G ++L R+I Y AQLLG+V +L T AL++ GVS A EI +T V Sbjct: 11 RAVFAEFFGTMFYVFFGLGASLKW-------AAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNTLHPGVSLGQATTVEIFLTLQFV 142
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13 Identity = 43/143 (30.07%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK------FSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVY 578 +A +AEF + ++F++ + + + + G + + A +F+ V A ISGGH+NPAVTFG + ++++R+++Y +AQ LG +V ++K ++ G A ++SG S+ A+ EI+ TF LVY Sbjct: 38 RALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANG--GGANMVASGYSTGTALGAEIIGTFVLVY 178
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13 Identity = 57/186 (30.65%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 78 RFSLTKFSIKMPIYRIAIGT---------------PGEASHPDALKAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTGGLETS---AFALSSGVSSWNAVVFEIVMTFGLVY 578 R KFS + PI A G+ PGE +A +AEF + +F++ + M + T A+ G+ + + +F V A ISGGH+NPAVTFG F+ ++L R++ Y + Q LG++ ++K F G ET+ A ++ G + + + EIV TF LVY Sbjct: 9 RLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVY 192
BLAST of FC876338 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13 Identity = 50/139 (35.97%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 168 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLV 575 +A AEFF+ + +VF G GS + + A P ++ ++A AL V +ISG HVNPAVTF VG ++LLR+ Y AQLLG+V +L T AL++ VS A EI +T V Sbjct: 11 RAIFAEFFATLFYVFFGLGSSLRW-------APGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFV 142 The following BLAST results are available for this feature:
BLAST of FC876338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876338 ID=FC876338; Name=FC876338; organism=Citrus clementina; type=EST; length=578bpback to top |