FC876339

Overview
NameFC876339
Unique NameFC876339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.504e-56
Identity = 109/188 (57.98%), Postives = 137/188 (72.87%), Query Frame = 3
Query:   93 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDI--GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            +++ + F+SESV EGHPDK+CD +SDAVLD CL+QDP S+VACET  KT M+M+ GEITTKAK+DY+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G F     ++  GAGDQG MFGYA +ET  FMPL+  LA +L  RLT+VRK+    +LRPDGK+QVTVEY +   A
Sbjct:    3 EIKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEYKDGKAA 190          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.270e-56
Identity = 109/179 (60.89%), Postives = 134/179 (74.86%), Query Frame = 3
Query:  105 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K   D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY ++ GA
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGA 182          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 5.578e-56
Identity = 107/180 (59.44%), Postives = 134/180 (74.44%), Query Frame = 3
Query:  102 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDP +KVACET  KT M+++ GEIT+KA VDY+K+VR+T + IG+     G D   C VL+ ++QQSP+IA GV  H  +  E+IGAGDQG MFGYATDET E MPL+ VLA KL  ++ E+R++    W RPD KTQVT EY  + G+
Sbjct:   28 TFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAAGV--HVNRAEEEIGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGS 205          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 106/185 (57.30%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDN 635
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP+++VA ET   T +V+VFGE++TKA VD +K+VRDT +SIG+V    G D D+C VLV++++QSPDIAQGV      R  D      IGAGDQG MFGYA +ET E MPL   L+ +L  ++  +RK+ T  WLRPD K QVTVEY  DN
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEYDEDN 187          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 6.819e-54
Identity = 113/184 (61.41%), Postives = 131/184 (71.20%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR-----PED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP  +VACET   T MV+V GEITT   VD  KIVR+T  +IG+     G D+D C VL +I +QSPDIA GV      +      ED IGAGDQG MFGYA +ETSE+MP++  +A KL  RL+EVRKN T  +LRPDGKTQVTVE Y DN A
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVE-YEDNKA 186          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.591e-53
Identity = 105/181 (58.01%), Postives = 127/181 (70.17%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDA+LDA L +DP ++VACETCT T +VMV GEI+T   VD  K+VR+T R IG+     G D D C V+  I++QS DIA GV      +       E +GAGDQG MFG+AT+ET  +MPL   +A KL  RLTEVRK+ T  +LRPDGKTQVTVEY N+
Sbjct:    4 LFTSESVTEGHPDKMCDQISDAILDAILTKDPNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENN 184          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.773e-53
Identity = 109/180 (60.56%), Postives = 128/180 (71.11%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDN 635
            M T LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITTKA VD E+I R T R IG+ S D+G DA+ C V+  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  +VRKN T  WLRPD K+Q+T +Y N+N
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTLPWLRPDAKSQITFQYDNNN 177          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.847e-53
Identity = 109/179 (60.89%), Postives = 127/179 (70.95%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            M T+LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P   GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN    WLRPD K+QVT +Y ND
Sbjct:    1 MTTYLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPLQQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGVLPWLRPDAKSQVTFQYNND 176          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.847e-53
Identity = 111/185 (60.00%), Postives = 131/185 (70.81%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNG 638
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACET   T +V+V GEITT   VD  KIVRDT R IG+     G DAD C VL +I++QSPDIA GV        G  T +  E IGAGDQG MFG+A +ET E MPL   LA +L  RL+EVRK +   +LRPDGKTQVTVE Y++NG
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDKALEAREGQMTDEEIEAIGAGDQGLMFGFACNETKELMPLPISLAHRLARRLSEVRKEAILPYLRPDGKTQVTVE-YDENG 190          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.680e-52
Identity = 106/183 (57.92%), Postives = 126/183 (68.85%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND 632
            LFTSESV EGHPDK+CDQISDA+LD  L++DP ++VACET   T +V+V GEITT+  VD  +I RD  R IG+     G DAD C V+ +I++QSPDIA GV+     R         E IGAGDQG M G+A DET E MP+  +LA KL  RL EVRKN T S+LRPDGKTQVTVEY  D
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTECYVDIPRIARDVIRDIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVNKALEARRGELTDAEIEAIGAGDQGLMIGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEED 186          
The following BLAST results are available for this feature:
BLAST of FC876339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BRAHW2.504e-5657.98S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK5_CAEEL3.270e-5660.89Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_DROME5.578e-5659.44S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK_LACPL3.061e-5457.30S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_CLOTE6.819e-5461.41S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_CLOBB2.591e-5358.01S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_PROMH5.773e-5360.56S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_PHOLL9.847e-5360.89S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]
METK_GEOSW9.847e-5360.00S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_THETN1.680e-5257.92S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]

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Properties
Property NameValue
Genbank descriptionC32003E11EF DevOvary1 Citrus clementina cDNA clone C32003E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876339 ID=FC876339; Name=FC876339; organism=Citrus clementina; type=EST; length=641bp
CAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGA
ATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGA
GACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGT
TGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGAT
CCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCAT
GGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTG
TTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTT
GACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGA
TATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTG
GTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCT
GAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCT
CACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGA
AGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCC
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