FC876339

Overview
NameFC876339
Unique NameFC876339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9909 contig Ccv1_Contig9909:8..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.040e-94
Identity = 165/182 (90.66%), Postives = 172/182 (94.51%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            ++TFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH T+RPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGA
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGA 186          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.040e-94
Identity = 166/182 (91.21%), Postives = 171/182 (93.96%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            M+TFL TSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIVR TCR IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDET E MPLSHVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEYYND GA
Sbjct:    1 MDTFLNTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGA 182          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.358e-94
Identity = 164/182 (90.11%), Postives = 172/182 (94.51%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYE+IVR TCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAG QGHMFGYATDET E MPL+HVLATKLGA+LTEVRKN TC+WLRPDGKTQVT+EY ND GA
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGYQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTIEYRNDGGA 182          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.358e-94
Identity = 163/182 (89.56%), Postives = 172/182 (94.51%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA +DYE+IVR TCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVT+EY N+ GA
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLIQDPDSKVACETCTKTNMVMVFGEITTKADIDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGA 182          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.774e-94
Identity = 162/181 (89.50%), Postives = 172/181 (95.03%), Query Frame = 3
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            ETFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDET E MPL+H+LATKLGARLTEVRKN TC+WLRPDGKTQVT+EY N+ GA
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGA 184          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.774e-94
Identity = 164/182 (90.11%), Postives = 171/182 (93.96%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HV ATKLGA+LTEVRKN TC WLRPDGKTQVTVEY NDNGA
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVWATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGA 182          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.774e-94
Identity = 162/181 (89.50%), Postives = 172/181 (95.03%), Query Frame = 3
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            ETFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDET E MPL+H+LATKLGARLTEVRKN TC+WLRPDGKTQVT+EY N+ GA
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGA 184          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.317e-94
Identity = 165/182 (90.66%), Postives = 170/182 (93.41%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYE+IVR TCR IGF+SDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E MP  HVLATKLGA+LTEVRKN TC WLRP GKTQVTVEY NDNGA
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETLELMPKCHVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGA 182          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.026e-94
Identity = 162/182 (89.01%), Postives = 173/182 (95.05%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            ME+FLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKAKV+YEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH +K+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA+LTEVRKN+TC WLRPDGKTQVTVEY N+ GA
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFTSPDVGLDADHCKVLVNIEQQSPDIAQGVHGHLSKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNNTCPWLRPDGKTQVTVEYRNEGGA 182          
BLAST of FC876339 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.026e-94
Identity = 163/182 (89.56%), Postives = 173/182 (95.05%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGA 641
            M+TFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKAKV+YEKIVRDTCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GA
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYRNEGGA 182          
The following BLAST results are available for this feature:
BLAST of FC876339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ATRNU1.040e-9490.66S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK2_DAUCA1.040e-9491.21S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK3_PICSI1.358e-9490.11S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK2_PICSI1.358e-9489.56S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK2_HORVU1.774e-9489.50S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_TOBAC1.774e-9490.11S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_HORVU1.774e-9489.50S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK_PINBN2.317e-9490.66S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK2_ACTCH3.026e-9489.01S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK1_VITVI3.026e-9489.56S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionC32003E11EF DevOvary1 Citrus clementina cDNA clone C32003E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876339 ID=FC876339; Name=FC876339; organism=Citrus clementina; type=EST; length=641bp
CAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGA
ATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGA
GACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGT
TGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGAT
CCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCAT
GGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTG
TTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTT
GACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGA
TATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTG
GTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCT
GAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCT
CACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGA
AGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCC
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