FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.360e-23
Identity = 53/120 (44.17%), Postives = 78/120 (65.00%), Query Frame = 3
Query:  192 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IG+LH       PH+S   L+ K GP+ ++QLG +P +VVSS E+A+++ K HD VF+ RPS+ +   +  G + V+F+P G YWR+ RKI + ELLSPKRV SF+ V  +EV   +  +
Sbjct:   43 IGNLHQL--GTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYG-STVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTI 159          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 4.389e-23
Identity = 54/121 (44.63%), Postives = 80/121 (66.12%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIG+LH  +    PH+ F KL+ K GP+ +++LG VP VV+SS E A+ VLKT+D    SRP  + +  +S G  D+TF+P G YWR+ RK+ V EL S K+V SF+ + ++EV+  + +V
Sbjct:   40 IIGNLH--HLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKV 158          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.732e-23
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIG+LH   +   PH++  KL++K GP+ ++ LGRVP VVVSS + A+QVL+ HD    +RPS+   + +S    D+ FSP   YW++ RK+CV EL S K+V+S + + D+EV + +  +
Sbjct:   39 IIGNLHQIGE--LPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSI 157          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 7.486e-23
Identity = 57/143 (39.86%), Postives = 83/143 (58.04%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV-KARCGLETD-MSDLIFAFCTD 611
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS E A ++LKTHD  FA+RP   +   +  G  DV F P G YWRQ + +C+  LL+ K V SF+ V ++EVN  M ++ KA C    + +S+L     +D
Sbjct:   42 VIGNLHQL--SLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSD 182          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22
Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMS 584
            IIG+LH   +   PH+S  KL++K GP+  ++LGRVP V+VSS E AKQ LK HD    SRP     + +S    D+ FSP   YW++ RK+ V EL S K+V+S + + D+EV + +  +      +T ++
Sbjct:   40 IIGNLHQLGE--LPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPIN 169          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22
Identity = 48/128 (37.50%), Postives = 79/128 (61.72%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLE 572
            +IG++H        H     LA+K GP+ +++LG V  ++V+S E+A++++KTHD  F+ RP  + ++ VS   + + FS +G YWRQ RKIC  ELL+ KRV SF+ + ++EV   + ++ A    E
Sbjct:   52 LIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEE 179          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22
Identity = 53/132 (40.15%), Postives = 80/132 (60.61%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMS 584
            IIG++H       PH     L+ K G + +++LG V  +VVSS E AK+V+KTHD +FASRP +L+ + +      V F+P G YWRQ RKI   ELLS KRV SF+ + ++ +  F+ R+    G + +++
Sbjct:   44 IIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNVT 175          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22
Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK 554
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS E A++VLKTHD  FA+RP   +   +  G  DV F+P G YWRQ + +C+  LL+ K V SF+ V +DEVN  + +++
Sbjct:   42 VIGNLHQL--SLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLE 161          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22
Identity = 53/135 (39.26%), Postives = 84/135 (62.22%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLI 593
            +IGHLHL +  + P  + A +A++ GP+ ++QLG V +VV+SS+E  K+ +K  D   A+R   + T+ +     D+ FSP   +WRQ RKICV+ELLS + V SF  +  DEV+R +  +++  G   DM++ I
Sbjct:   44 LIGHLHLLWG-KLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAGAAVDMTERI 177          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22
Identity = 53/139 (38.13%), Postives = 80/139 (57.55%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFC 605
            IIG+LH       PH+S  KL++K GP+  + LG  P +V SS E  + ++KT+D V+++RP       +  G  DV+FSP+G YWRQ R I V  LLS KRV S++   ++E +  + ++K      +  +DL   FC
Sbjct:   34 IIGNLHQLGLH--PHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFC 170          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71A9_SOYBN3.360e-2344.17Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71B2_ARATH4.389e-2344.63Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71BW_ARATH5.732e-2342.15Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH7.486e-2339.86Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH1.277e-2240.15Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71DA_SOYBN1.668e-2237.50Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71D9_SOYBN1.668e-2240.15Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71AD_ARATH1.668e-2242.62Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI2.178e-2239.26Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71A3_SOLME2.178e-2238.13Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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