FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTK---HVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMS 545
            IIG++H   K   PH SFA LA+  GPI  ++ G + +VV++S E A++VL+THDQ+ + R S  S +   H  V  + +   P+   WR  RK+ VT + SP+R  + K +   +V   +S
Sbjct:   47 IIGNIHQVGKN--PHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEV--SVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVS 164          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.043e-12
Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFM 542
            PH + AK+A+K GPI Y+++G    VV S+   AK  LKT D  F++RP      H++    D+ F+P GP W+  RK+    +L  K + ++  V  +E+   +
Sbjct:   56 PHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHML 160          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 38/131 (29.01%), Postives = 66/131 (50.38%), Query Frame = 3
Query:  225 KPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCTDFF 617
            KPH  FA+LA+  G IF +++G    VV S+   A ++LKTHD++ ++R    S +        + +S     W+  RK+C TEL + K + S   V + +    +  +  + G E  + ++IF    + F
Sbjct:   48 KPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIF 178          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 38/131 (29.01%), Postives = 66/131 (50.38%), Query Frame = 3
Query:  225 KPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCTDFF 617
            KPH  FA+LA+  G IF +++G    VV S+   A ++LKTHD++ ++R    S +        + +S     W+  RK+C TEL + K + S   V + +    +  +  + G E  + ++IF    + F
Sbjct:   47 KPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIF 177          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12
Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFM 542
            PH S AK+A+K G I Y+++G    VV S+ + AK  LKT D  F++RP      H++ G  D+ F+  GP W+  RK+    +L  K + ++  V  +E+   +
Sbjct:   53 PHVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHML 157          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEV 530
            PH + A +A+K GP+ Y+++G     V S+ E AK  LKT D  F++RP      H++    D+ F+  GP W+  RK+    +L  K +  ++ V   E+
Sbjct:   57 PHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKEL 157          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEV 530
            PH + A +A+K GP+ Y+++G     V S+ E AK  LKT D  F++RP      H++    D+ F+  GP W+  RK+    +L  K +  ++ V   E+
Sbjct:   57 PHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKEL 157          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C76C4_ARATH4.117e-1336.89Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C75A2_SOLME2.043e-1234.29Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C80B2_ESCCA5.945e-1229.01(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA5.945e-1229.01(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C75A3_PETHY7.765e-1234.29Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A7_EUSGR3.854e-1132.67Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR3.854e-1132.67Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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