FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIG+LH   +   PH+S  +L++K G +  ++ G +P VVVSS E AKQVLK HD    SRPS+   + +S    D+ FSP   YW++ R+ICV EL S KRV SF+ + +DEV + +  V
Sbjct:   40 IIGNLHQLGE--LPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSV 158          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22
Identity = 50/143 (34.97%), Postives = 85/143 (59.44%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLET--DMSDLIFAFCTD 611
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS ++A  ++KTHD   A+RP +   + +  G  ++ FSP G YWRQ + +C+  LL+ K+V SF+ V ++E++  M RV+      +  ++S+L+    +D
Sbjct:   42 VIGNLHQL--SLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSD 182          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 6.337e-22
Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 3
Query:  222 RKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLI 593
            R PH+S   L+ + GP+  +  G VP +VVSS + AK VLKTHD+VFASRP       +     DV  +P G YWRQ + +CV  L S K V SF+ V  +E++  + +++    L  ++S+++
Sbjct:   51 RHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKIRISSSLRINLSEIL 174          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.277e-22
Identity = 52/135 (38.52%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLI 593
            ++GHLHL +  + P  + A +A+K GP+ ++QLG V +VV+SS+E  K+ +K  D   A R   + T+ +     D+ FSP   +WRQ RKICV+ELLS + V SF  +  DE++R +  +++  G   DM++ I
Sbjct:   43 LVGHLHLLWG-KLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERI 176          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.277e-22
Identity = 52/135 (38.52%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLI 593
            ++GHLHL +  + P  + A +A+K GP+ ++QLG V +VV+SS+E  K+ +K  D   A R   + T+ +     D+ FSP   +WRQ RKICV+ELLS + V SF  +  DE++R +  +++  G   DM++ I
Sbjct:   43 LVGHLHLLWG-KLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERI 176          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.081e-21
Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLE 572
            IIG+LH      KPH+S  KL+EK GP+ Y++LG+VP+VV S+ E  K VLKT D+   SR  +     +S    D+ F+P   YW+  RK+ V EL + KRV SF+ + ++EV  F+  +K    LE
Sbjct:   38 IIGNLHQLGS--KPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLE 163          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.081e-21
Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLET 575
            IIG+LH   +   PH+S  KL++K GP+  ++LGRVP V+VS+ E AKQVLK +D    SRPS+  T+ +S    D+ FS    YW++ RK+CV EL   KR+NS + + + E+ + +  +      +T
Sbjct:   39 IIGNLHQLGE--LPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKT 165          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMS 584
            IIG+LH   +   PH+S   L++K GP+  ++ G +P VVVSS E AKQ LK HD    SRPS+   + +S    D+ FSP   YW++ R++CV EL SPK+V+  + + ++EV + M+        +T ++
Sbjct:   40 IIGNLHQLGE--LPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVN 169          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21
Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFM 542
            IIG+LH   +   PH+S   L++  GP+  ++LG VP VVVSS E AKQVLK +D    SRPS+   K +S    D+ FSP   YW++ R+ICV EL S KRV+S + + ++EV + +
Sbjct:   40 IIGNLHQLGE--LPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVRKLI 155          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21
Identity = 52/125 (41.60%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARC 563
            IIG+LH       PH+S  KL++K GP+  + LG  P +V SS + A+ +LKTHD V+A+RP       +  G  DV FSP G YW Q R I V  LLS KRV S++ V ++E    + +++  C
Sbjct:   45 IIGNLHQLGSH--PHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGC 167          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71BX_ARATH2.845e-2244.63Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH3.715e-2234.97Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH6.337e-2238.71Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP8.277e-2238.52Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR8.277e-2238.52Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BD_ARATH1.081e-2142.19Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH1.081e-2140.31Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH1.412e-2138.64Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.412e-2144.92Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME1.412e-2141.60Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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