FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSD 587
            +IGHLH  +     H  F  +A+K GP+ ++QLG V +VV+SS E AKQ +K  D  FA R   + ++ +     D+ FSP   +WRQ R+ICVTELLSPK V SF  +  +E+ R +  + +  G   D+++
Sbjct:   43 VIGHLHFLWGGLPQHV-FRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTE 174          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSD 587
            +IGHLH  +     H  F  +A+K GP+ ++QLG V +VV+SS E AKQ +K  D  FA R   + ++ +     D+ FSP   +WRQ R+ICVTELLSPK V SF  +  +E+ R +  + +  G   D+++
Sbjct:   43 VIGHLHFLWGGLPQHV-FRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTE 174          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21
Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSD 587
            +IGHLHL +    P      +A + GP+ ++QLG V +VV+SS E AKQ +K  D  FA R   + ++ +     D+ FSP   +W Q RKICV+ELLSPK V SF  +  +E+ R +  +K   G   D+++
Sbjct:   40 VIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIRVMKQSEGAPVDVTE 172          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.365e-21
Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRP-SILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIGHLHL      PH+ F KL+ + GPI ++ LG VP VV S+ E AK+ LKTH+  F++RP + ++ + ++ G  D  F+P GPYW+  +K+C++ELL    ++ F  V   E  +F+ RV
Sbjct:   40 IIGHLHLL--SPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRV 159          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.007e-21
Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK 554
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS E A++VLKTHD  FA+RP   +   +  G  DV F P G YWRQ + +C+  LL+ K V SF+ + ++E+N  + +++
Sbjct:   42 LIGNLHQL--SLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLE 161          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.151e-21
Identity = 55/137 (40.15%), Postives = 82/137 (59.85%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMS--RVKARCGLETDMSDLI 593
            +IGHLHL +  + P  + A +A++ GP+ ++QLG V +VV+SS+E  K+ +K  D   A R   + TK +     D+ FSP   +WRQ RKICV+ELLS + V SF  +  DEV+R +   R  A  G   D+++ I
Sbjct:   44 LIGHLHLLWG-KLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERI 179          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.151e-21
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARC 563
            IIG+LH       PH+S  KL++K GP+  +  G  P +V SS + A+ ++KTHD V+ASRP       +S G  DV FSP G YWR+A+ I V  LLS  RV S++ V  +E    + +++  C
Sbjct:   46 IIGNLHQLGS--LPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGC 168          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.195e-20
Identity = 54/134 (40.30%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDL 590
            IIG+LH F   R  HKS  K++++ GP+  +  G VP ++VSSKE A++VLKTHD    SRP  + +   +    D+ F+P G  WR+ RKI V+EL S K++ SF+ + +DE ++ + R  ++  LET  S +
Sbjct:   37 IIGNLHQF--GRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDE-SQLLVRKVSKSALETPTSSV 167          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.561e-20
Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGP--IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK----ARCGLETDMSDLIFAFCTDF 614
            IIGHLHL      PH SF  L  K G   +  +Q+G VP +VVS+ + A+ VL+THD V ASRP       +     DV F+P G YWR ARK+  T LLS K V S +   ++EV   ++R++    A  G   DM++L+  + +DF
Sbjct:   65 IIGHLHLIGSH--PHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDMTELLGGYASDF 210          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.663e-20
Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDE----VNRFMSRVKARCGLETDMSDLIFAFCTDFF 617
            ++G+LH       PH+S   L+ + GP+  +  G VP +V SS E A++++K  D  F++RP++   + +     DV F+P G YWRQ R ICV +LLS KRV SF+ V ++E    V + M   K       +++DL+     D F
Sbjct:   36 VLGNLHQL--GTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVF 180          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71DI_MENSP1.844e-2139.85Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR1.844e-2139.85Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C7D94_MENGR2.408e-2139.10Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C93A3_SOYBN5.365e-2141.80Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71AC_ARATH7.007e-2140.16Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI9.151e-2140.15Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71A2_SOLME9.151e-2140.80Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71B5_ARATH1.195e-2040.30Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71C1_MAIZE1.561e-2040.54Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71A6_NEPRA2.663e-2035.37Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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