FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.932e-20
Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRP-SILSTKHVSVGPAD--VTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV--KARCGLETDMSD 587
            IIGHLHL      PH+ F KL+ + GPI  + LG VP VV S+ E AK+ LKTH+  F++RP   ++ K ++    D    F+P GPYW+  +K+C++ELLS + ++ F  V   E  RF+SRV  K   G   D  D
Sbjct:   38 IIGHLHLV--SPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGD 173          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.747e-20
Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK 554
            +IG+LH       PH+S   L+ + GP+  +  GRVP +VVSS ++A  ++KTHD   A+RP +   + +  G  +V FSP G YWRQ + +CV  LL+ K V SF  V ++E +  M +V+
Sbjct:   41 VIGNLHQL--SLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVE 160          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19
Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCT 608
            IIG+L   +   KPH+S A +A+  GP+ Y+++G V  VV +S  +A Q LKTHD  F+SRP     +H++    D+ F+P GP WR  RKIC   L S K ++ F+ V  DEV + ++R  A  G +      +   CT
Sbjct:   42 IIGNL--VHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEV-KTLTRALASAGQKPVKLGQLLNVCT 178          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19
Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 3
Query:  231 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSIL-STKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFM----SRVKARCGLETDMSDLIFAFCT 608
            H     LA+K GP+ ++++G V  +V SS ++A+++ +THD +FA RPS L S K VS   +D+  SP G YWRQ RKI + ELLS K V SF+ + ++EV  F+    S+   R  L  ++S LI+   T
Sbjct:   48 HHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITT 178          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19
Identity = 47/126 (37.30%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV-KARC 563
            +IG+LH        H+S   L+ + GP+  +  GR P ++VSS ++A  V+KTHD V A+RP       +  G  DV F+P G YWRQ + IC+  LL+ K V S++ + ++E+ R + ++ KA C
Sbjct:   41 VIGNLHQL--SLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASC 164          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.321e-19
Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDE 527
            IIG+LH  Y    PHK    L +  GP+  +QLG VP VV+SS + A++VLKTHD    SRP  +++K +S    D+ F+P G  WR  RK+ V EL S K+ NSF+ + ++E
Sbjct:   40 IIGNLH--YLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEE 150          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.254e-19
Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEV 530
            IIGHL L    + PHK+   LA+K GPIF I++G   AVVVS+ E+AK+   T+D   +S P ++S   +    + +  +P GPYWRQ RKI ++E LSP RV     V   EV
Sbjct:   46 IIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEV 159          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.254e-19
Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDE 527
            IIG+LH   +E  P  S   L+EK GPI +++ G VP VV+SSKE A++VLKTHD    SRP  + T+ +S    D+ F+P G  WR  RK+ V EL S K++ SF+ + ++E
Sbjct:   37 IIGNLHQ-RRELHPRNS-RNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEE 147          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.254e-19
Identity = 49/140 (35.00%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLET--DMSDLIFAF 602
            IIG+LH   K    H+SF KL++  GP+ ++  G VP VVVS++E A++VLKTHD    +RP + +TK  S    D+ F+  G  WR+ RK+ + EL S K++ +F+ + ++E    ++++       T  D+   +F++
Sbjct:   37 IIGNLHQLGKSL--HRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSY 174          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.944e-19
Identity = 57/147 (38.78%), Postives = 80/147 (54.42%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGP--IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARC----GLETDMSDLIFAFCTD 611
            IIGHLHL   E   H S   L  K G   +  +++G VP + VSS   A  VL+T D +FASRP  ++ + +  GP+DV F P G Y RQ RK+  T +LS K+V SF+    +EV   M +++A          D+SDL+  +  D
Sbjct:   68 IIGHLHLIGAET--HISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRAAATAAPPAAVDLSDLLSGYTND 212          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C93A1_SOYBN5.932e-2042.03Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71AF_ARATH7.747e-2039.34Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
F3PH_PETHY1.012e-1938.57Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71DC_CATRO1.012e-1941.22Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71AK_ARATH1.012e-1937.30Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH1.321e-1944.25Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C82A2_SOYBN2.254e-1943.86Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71BS_ARATH2.254e-1945.13Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH2.254e-1935.00Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71C2_MAIZE2.944e-1938.78Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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