FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.845e-19
Identity = 48/141 (34.04%), Postives = 77/141 (54.61%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCTD 611
            +IG+LH     + PH+S   L+ + GP+  +  G VP +V S+ E A+ VLKTHD+VFASRP     + +     ++  +P G YWRQ + + V  LLS K V SF+ V  +E+   M  ++       ++S ++ +   D
Sbjct:   38 LIGNLHQL--SQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTND 176          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.021e-19
Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETD--MSDLIFA 599
            I+G+LHL      PHK+  +LA + GP+  ++LG VP VVVSS E A++VLK HD    SRP+    K +S    +V F+P G YWR+ RK+   ELLS +RV +     + E++R ++ +      +    ++D +FA
Sbjct:   64 ILGNLHLLGP--LPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLNDHVFA 200          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.021e-19
Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGP-IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK--ARCGLETDMSDLIFAF 602
            IIGHLHL      P+ S A LA + GP +  ++LG VP VVVSS  +A+ VL+T+D VF+SRP  L +  +  G  D  F+P G ++R+ARK+    LL+  +V S +   ++EV   + RV+  A      DMS+L+ +F
Sbjct:   77 IIGHLHLMGDI--PYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSF 215          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCG 566
            +IG+L L     +PH +   LA K GP+ Y++LG+V AVV+SS   A++VL+  D  FASRPS+L    +  G  D++F+P G  WR  RK+C++ELL+  +V     V D E    + +V    G
Sbjct:   36 LIGNL-LHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAG 160          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 45/121 (37.19%), Postives = 76/121 (62.81%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            +IG+LH   +   PH+SF +LAE+ G +  +  G VP  V+SS+E A++VL+THD    +RP ++ ++ +S G  D++F+P G  WR+ RK  V EL   K+V  F  ++++E N  + ++
Sbjct:   39 VIGNLHQVGE--LPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKL 157          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK 554
            +IG+LH        H+S   L+ + GP+  +  GR P ++VSS ++A  +LKT+D + A+RP       +  G  DV F+P G YW+Q + IC+  LLS K V S+K + +DE+   + +V+
Sbjct:   42 VIGNLHQL--SLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVE 161          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK 554
            +IG+LH       PH++ + L+ + GP+  ++ GRVP ++VSS ++A  V+KTHD  FA+RP   S   +S G  D+ F+P G YWR  + +C   LLS K V S +   ++E+   M  ++
Sbjct:   41 VIGNLHQL--SLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLE 160          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEV 530
            I GHL L    + PHK+   LAEK GP+F I+LG   A+VVS  E+A++   T+D   ++RP +L  + +    A +  +P GPYWR+ RKI VTE+LS  RV   + V   EV
Sbjct:   49 IFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEV 162          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLE 572
            IIG+LH      KP +S  KL+EK G +  ++ G V AVV S+ E  K VLKT D    SRP +     V+    D+ FSP   YWR+ RK+ V EL + KRV SF+ V  +EV  F+  +K    LE
Sbjct:   38 IIGNLHQLGS--KPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLE 163          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18
Identity = 45/132 (34.09%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMS 584
            IIG+LH   + +  H+S  KL++K GP+  ++LG+VP +++SS E AKQ L+ +D    SRPS+   + +S    D++ SP   YW++ RK+C  EL S  ++ S + + D+EV + +  +     L+  ++
Sbjct:   40 IIGNLHQLGELQ--HQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAESSSLKNPVN 169          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71AN_ARATH3.845e-1934.04Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI5.021e-1938.134-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71C4_MAIZE5.021e-1940.43Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C99A1_SORBI6.558e-1939.68Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BG_ARATH6.558e-1937.19Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH6.558e-1936.07Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH6.558e-1936.89Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C82A4_SOYBN8.565e-1942.98Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C71BE_ARATH8.565e-1942.19Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BQ_ARATH1.119e-1834.09Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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