FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18
Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLE 572
            IIG+LH      KPH+S  KL+E  GP+  ++ G V  VV S+ E  K+VLKT D    SRP++     V+    D+ FSP   YWR+ RK+ V EL + KRV SF+    +EV   +  +K    LE
Sbjct:   38 IIGNLHQLGS--KPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLE 163          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.461e-18
Identity = 48/137 (35.04%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFA 599
            IIG++ +   ++  H+  A LA+K G + ++++G +    VSS E+A+QVL+  D VF++RP+ ++  +++   AD+ F+  GP+WRQ RK+CV ++ S KR  S+  V  DEV++ +  V    G   ++ + IFA
Sbjct:   49 IIGNMLMM--DQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASV-RDEVDKMVRSVSCNVGKPINVGEQIFA 182          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.461e-18
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEV 530
            I+GHL L    + PHK    LA+K GP+F I+LG  PA+V+S+ E++K++  T+D   +SRP +++ + +S   A V  +P GPYWR+ RKI   E LS +R+     +   EV
Sbjct:   47 ILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEV 160          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.461e-18
Identity = 53/142 (37.32%), Postives = 82/142 (57.75%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDE----VNRFMSRVKARCGLETDMSDLIFAF 602
            IIG+LH   K    +KSF K++++ GP+  ++LG VP +VVSSKE A++VLKTHD    +RP   +T   +    D+ F+P G  WR+ RKI   EL S K++ SF+ + ++E    V +    V        D+  ++F+F
Sbjct:   37 IIGNLHQLGKLL--YKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSF 176          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.908e-18
Identity = 48/140 (34.29%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLET--DMSDLIFAF 602
            IIG+LH   K    H+SF KL+++ GP+ +++ G VP VV S+KE A++VLKTHD    +RP + +T   +    D+ F+  G  WR+ RK+ + EL S K++ +F+ + ++E    + +V      +T  D+   +F++
Sbjct:   37 IIGNLHQLGKSL--HRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSY 174          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.492e-18
Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = 3
Query:  195 GHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCG 566
            G LHL   +  P  +   LA K GP+ +++ G+V  VV+SS   A++VL+  D  FASRPS+L ++    G  D+ F+P G YWR  RK+C  ELLS K V     + D E    +  ++A  G
Sbjct:   47 GLLHLLRSQ--PQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAG 168          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.492e-18
Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 3
Query:  195 GHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKA 557
            G LHL      P  +  +LA K GP+ ++++G++  VVVSS   A++VL+  D +FASRPS+L ++       DV F+P G YWR  RK+C  ELLS K V     V +DE    +  +KA
Sbjct:   71 GLLHLLRSH--PQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKA 189          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18
Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVN 533
            +IG+LH   +   PH+S   LAE+ GP+  +  G VP  VVSS+E A++VL+THD    SRP ++ T+ +S    DV F+P G  W+  RK  + EL   K+V SF+ + ++E N
Sbjct:   39 VIGNLHQIGE--LPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECN 151          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.251e-18
Identity = 45/121 (37.19%), Postives = 76/121 (62.81%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            +IG+LH   +   PH+SF +LAE+ G +  + LG VP  V+SS+E A++VL+THD    SRP+++ ++ +S G  D+ F+P G  W++ R+  V EL   K++ SF  + + E N  + ++
Sbjct:   39 VIGNLHQVGE--LPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKL 157          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.552e-18
Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFM 542
            IIG+LH   +  KPH++  +L++  GP+  ++LG V  VV +S E  + VLKT+D    SRP +     ++    D+ FSP   YWRQ RK+ V EL + KRV SF+ + ++EV  F+
Sbjct:   38 IIGNLHQLGE--KPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFV 153          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71BC_ARATH1.119e-1840.63Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH1.461e-1835.04Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C82A3_SOYBN1.461e-1840.35Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71BZ_ARATH1.461e-1837.32Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH1.908e-1834.29Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ2.492e-1838.71Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C99A2_ORYSJ2.492e-1840.50Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71BK_ARATH3.255e-1840.87Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH4.251e-1837.19Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR5.552e-1839.83Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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