FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.251e-18
Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDE 527
            IIG+LH       PH  F  L++K GP+  +  G VP VV+SSKE A++ LKT D    SRP  ++T+ +S    D+ F+P G  W+  RK+ V ELL+ K+  SF+ + ++E
Sbjct:   41 IIGNLHNL--TGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEE 151          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVN 533
            +IG+LH   +   PH+S   LAE+ GP+  +  G VP  VVSS+E A++VL+THD    SRP ++ T+ +S    D+ F+P G  W+  RK  + EL   K+V SF+ + ++E N
Sbjct:   39 VIGNLHQIGE--LPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECN 151          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17
Identity = 49/138 (35.51%), Postives = 80/138 (57.97%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLET--DMSDLIF 596
            IIG+LH    +   HK    L++K GP+ +++LG  P VV+SS E A++ LKTHD    SRP  ++++  S    D+ F   G  WR+ RK+ V E  S K+V SFK + ++E +  + ++K     ++  D+S ++F
Sbjct:   41 IIGNLHQL--QGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILF 176          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 49/138 (35.51%), Postives = 80/138 (57.97%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPK--------RVNSFKVVLDDEVNRFMSRVKARCGLETD 578
            ++GHL L    + PHK+   L +K GPIF I+LG   A+V+S+ ELAK+    +D V +SRP  ++ + +S   A + ++P G YWRQ RKI   E+LS +        RV+  +  + + VN + +++ ++ GL  D
Sbjct:   44 LLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQTSIKELVNVWSNQISSQYGLLDD 181          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 52/140 (37.14%), Postives = 79/140 (56.43%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLE--TDMSDLIFAF 602
            +IG+L L  ++  P + FA  A+K GPI   ++G    VV+SS ELAK++LKT D  FA RP     + +S G  D+  +   PY+R+ RK+ +  L SP RV +FK V ++E  R M ++          D+S+L+  F
Sbjct:   39 VIGNL-LQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTF 177          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 50/128 (39.06%), Postives = 68/128 (53.12%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLE 572
            IIG+LH      KPH S  KL+EK GP+  ++ G V  VV S+ E  K+VLKT D    SRP +     ++    D+ F P   YWR+ RK+ V EL + KRV SF+    +EV   +  +     LE
Sbjct:   38 IIGNLHQLGS--KPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLE 163          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV--KARCGLETDMSDLIFAFCTDF 614
            I+G++H       PH+S   L+ K GP+  + LG V  VVV S E A++VLK HD    +RP +  TK        + F+  G Y+R  RK+CV EL S KR NSF+ + ++E++R ++     A  G   D++  +  F   F
Sbjct:   45 ILGNIHQLGS--LPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASF 186          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 47/141 (33.33%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSP-NGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCT 608
            IIG++HL  K   PH+SFA+L++  GP+  ++LG +  VV++S E A++VL+THDQ+ ++R    + + ++   A + + P +   WR  R++ VT+LLSP+R+ + K +  ++V   +S +      E  +     AF T
Sbjct:   47 IIGNIHLVGKH--PHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFIT 185          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV--KARCGLETDMSDLIFAF 602
            IIG+LH   K    H  F +L++  GPIF +++G     V+SS ELAK++LKT D  F +RP +   + +S    ++ F     Y+R+ RK+C+  L SP RV SF+ V ++E  R M ++   A      D+S+L+ +F
Sbjct:   38 IIGNLHQMEKFNPQHFLF-RLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSF 176          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGP--IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARC----GLETDMSDLIFAFCTD 611
            I+GHLH  +   + H S  +L  K G     +++ G VP ++VSS   A+ V++THD + ASRP  +++  +     DV FSP G YW+Q RK+  T LLS K+V SF+   ++EV   +  ++           DMS+++ A+  D
Sbjct:   66 IVGHLH--HIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPSTAVDMSEVLAAYTND 210          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71B7_ARATH7.251e-1840.71Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71BJ_ARATH9.470e-1840.00Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH2.110e-1735.51Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C82A1_PEA2.755e-1735.51Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C83A1_ARATH3.599e-1737.14Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BB_ARATH3.599e-1739.06Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH3.599e-1735.42Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH6.138e-1733.33Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C83B1_ARATH1.047e-1636.43Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE1.047e-1634.69Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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