FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCG 566
            IIG+L   +   KPH++ + +    GPI +++LG V  VV +SK +A+Q LK HD  FASRP     KH++    D+ F+P G  WR  RKI    L S K +  FK V  +EV   ++R   R G
Sbjct:   42 IIGNLP--HMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGT-LTRELVRVG 164          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIGHLHL      PH+ F KL+ + GPI  + LG VP VV S+ E AK+ LKTH+  F++RP     ++V+V      F P GP  +  +K+C++ELL  + ++ F  V   E  +F+ RV
Sbjct:   38 IIGHLHLV--SPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPG----QNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRV 152          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRP---SILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMS 545
            IIG++HL    R PH SFA L++  GPI  ++ G +  VVV+S E A++VL+T+DQ+ +SR    SI S  H  V  + V   P+   WR  RK+  T+L SP+R+ + K + +++V   +S
Sbjct:   47 IIGNIHLV--GRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKV--SVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVS 164          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15
Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGL 569
            I+G+L+     R   + + + A+  GPI  + +G +  VVVSS ELAK+VLK HDQ  A R    ST+  S    D+ ++  GP++ + RK+C  EL +PKR+ S + + +DEV   +  V   C L
Sbjct:   36 IVGNLYDIKPVR--FRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNL 160          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 48/140 (34.29%), Postives = 78/140 (55.71%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLET--DMSDLIFAF 602
            IIG+LH     R  H SF KL+ + GP+  ++ G VP VV+SSKE AKQVLK+ D    SRP +++    +    D+ F+  G  WR+ +K+   EL +PK+   F+ + ++E +  + ++      +T  D+    F+F
Sbjct:   39 IIGNLHQL--GRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTLVDLRKAFFSF 176          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARC 563
            ++G+L+     R   + FA+ A+  GPI  +  G    V+VS+ ELAK+VLK HDQ+ A R    S    S    D+ ++  GP++ + RK+C  EL SPKR+ + + + +DEV   +  V   C
Sbjct:   37 VVGNLYDIKPVR--FRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHC 159          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 46/140 (32.86%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLET--DMSDLIFAF 602
            +IG+LH     R  H S  KL+ + GP+  ++ G VP  V SS E AK+VLKTHD    +RP +++    + G  D+ F+  G  WR+ +K    EL SPK+  SF+ + ++E +  + ++      +T  D+   +F++
Sbjct:   37 LIGNLHQL--GRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSY 174          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 3
Query:  234 KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            + F + AE+ GP+  +  G    VVVS+ ELAK+VLK +DQ  A RP   ST+  S    D+ ++  GP++ + RK+C  EL +PKR+ + + + +DEV   +  V
Sbjct:   53 RCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESV 158          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 3
Query:  192 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDE 527
            IG+LH   +E  P      L  K GP+  ++ G VP VV+SSKE A++VLK HD    SRP    T+ +S    D+ F+P G  W+  RK+ V EL + K+   F+ + ++E
Sbjct:   38 IGNLHQL-QELPPRN----LNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEE 144          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK 554
            I+G+LH    +   H+   +L++K GP+ ++QLG VP V++SS E A++ LKTHD    +RP+  + +  S    ++        WR+ RK+ V E  S K+V SF+ V ++E +  + +++
Sbjct:   41 IVGNLHQL--QGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLR 160          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
F3PH_ARATH1.786e-1639.68Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C93A2_SOYBN3.046e-1640.50Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C76C2_ARATH8.864e-1639.34Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C98A3_ARATH1.158e-1537.01Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71B8_ARATH1.512e-1534.29Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN4.399e-1535.20Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71BU_ARATH4.399e-1532.86Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI2.851e-1437.74Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BT_ARATH2.851e-1438.39Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH3.724e-1432.79Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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