FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPH-KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVN 533
            IIG+LH   + R  H ++   LAE  GP+  +Q G VP V +SSKE A++VLK +D    SRP     +       D+  +P G  W   RK+ V EL S K++ SFK ++++E N
Sbjct:   37 IIGNLH---QRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENN 149          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 47/147 (31.97%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVP----AVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV--KARCGLETDMSDLIFAFCTD 611
            +IG+LH       PH+SF  L+ +L       L   P    +  +SS ++A  V+KTHD  FA+RP   +   +  G  DV FS  G YWRQ + +C   LL  + V SF+ V ++E+   + ++  ++   L  ++SDL+     D
Sbjct:   40 VIGYLHQL--SLHPHRSFRSLSLRLWSAHAPSLRSCPYPRFSKYISSSDVAHDVMKTHDLKFANRPKTKAVDIIINGGRDVAFSSYGEYWRQMKSLCTVHLLGRQMVRSFEKVREEEITSVIWKLEKQSSSSLPVNLSDLLLNMSND 184          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 41/143 (28.67%), Postives = 72/143 (50.35%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK--ARCGLETDMSDLIFAFCTD 611
            +IG+LH       PH+    L+ + GP+  +  GRVP +VVS  ++   ++KTHD  FA+RP   +      G  D+ F P G  W+  + + V  LL+ K V SF+ + ++E+     +++  +      ++S L+     D
Sbjct:   42 VIGNLHQLGPN--PHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTND 182          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 45/163 (27.61%), Postives = 80/163 (49.08%), Query Frame = 3
Query:   72 PEILFLSFVVSTAILYMIXXXXXXXXXXXXXXXXXXXXXIIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKAR 560
            P+++ +S +VS  I Y                       IIGH+H+       H+SF  L+ + GP+F +  G V  VV S+   AKQ+L+T++  F  R    + K ++   + + F+P G YWR  +K+ + ELL  + +N+F+ +   E ++ +  +  R
Sbjct:    3 PQLVAVSVLVSALICYFFFRPYFHRYGKNLPPSPFFRLPIIGHMHMLGPLL--HQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTY-ESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNR 162          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRF 539
            IIGHLH        HKS  +L+ K GP+ ++ +   P V+VSS  +A ++ K HD   +SR +    + + VG +    +P G YW+  +K+ VT+LL P+ +   + +  DE+ RF
Sbjct:   48 IIGHLHHLLSSLA-HKSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVFVGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADELERF 163          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIG L L      PH S A +A K GPI Y++LG    VV S+ + A+  LKTHD  F++RP      +++    D+ F+  GP W+  RK+C   +L PK +  +  V   EV   +  +
Sbjct:   47 IIGALPLL--GTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEM 165          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 44/135 (32.59%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  192 IGHLHLFYKERKP--HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLK-THDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSD 587
            +GHLHL     KP  H+   + + + GPIF ++ G    VV++S  LA++     +D V +SRP  L+ K+V+     V  +P G +WR  R+IC  E+LS  R+ +F+ +  DE+ R ++R+        + +D
Sbjct:   38 VGHLHLM----KPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESND 168          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 3
Query:  189 IIGHLHLFYKERKP--HKSFAKLAEKL-----GPIFYIQLG-RVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDL 590
            IIGHL L     KP  H++    +E L     G +  ++LG R+  VV S K  A++    +D V A+RP ++  KHV     ++  +P G +WR  R++C  E+ S  R+N F  V  DEV R +SR+    G +  + +L
Sbjct:   43 IIGHLRLL----KPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGKNDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVRRLISRLSRLAGTKKTVVEL 180          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 46/142 (32.39%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  189 IIGHLH----LFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK--ARCGLETDMSDLIF 596
            IIG+LH    LF      H+    L++K GP+  ++LG +  VV+SSKE A++VLK HD    +RP   ++   S    D+ F+P G   R+ RK+ +    S ++V SF+ + ++E +  + ++K  A+     D+S  +F
Sbjct:   38 IIGNLHQLRGLF------HRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKNTVDLSQTLF 173          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13
Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIG+LH  + +R  H++F  L+EK G +F +  G    VVVSS    +Q    +D V A+RP  LS K++      +  +  G +WR  R+I   ++LS  R+NSF  +  DE  R ++R+
Sbjct:   41 IIGNLH--HLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRL 159          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71BF_ARATH4.864e-1438.79Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71AS_ARATH4.864e-1431.97Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
C71AR_ARATH8.296e-1428.67Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC1.084e-1327.61Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C75AK_ARATH1.084e-1334.19Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C75A6_CAMME1.084e-1335.54Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C81F1_ARATH1.848e-1332.59Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C81D1_ARATH1.848e-1333.80Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH1.848e-1332.39Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C81E1_GLYEC3.152e-1335.54Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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