FC876345

Overview
NameFC876345
Unique NameFC876345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9339 contig Ccv1_Contig9339:811..1360. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_RABIT (Elongation factor 1-alpha 1 OS=Oryctolagus cuniculus GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_PONAB (Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF1A1 PE=2 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_PANTR (Elongation factor 1-alpha 1 OS=Pan troglodytes GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_MOUSE (Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef1a1 PE=1 SV=3)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_HUMAN (Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_FELCA (Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.215e-78
Identity = 142/183 (77.60%), Postives = 160/183 (87.43%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETGV+KPGMVVTF P  +TTEVKSVEMHHEAL EA+PGDNVGFNVKNV+VKD++RG VA +SK+DP  EA +FT+QVII+NHPGQIG GYAPVLDCHT+ IA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V MIP KPM V++FSDYPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGV 437
[Close]
BLAST of FC876345 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 3.779e-78
Identity = 135/183 (73.77%), Postives = 164/183 (89.62%), Query Frame = 1 
Query:    1 KIGGIGTAPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSPIALKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVDTFSDYPPLGRFAVRDMRHTAAVGV 549
            KIGGIGT PVGRVETG++KPGMVV+F PS +TTEVKSVEMHHE L E LPGDNVGFNVKNV+VKD++RG VAS+SK+DPA+EAA+F +QVI++NHPGQIG GYAPVLDCHT+ IA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VK++P+KPM V+++++YPPLGRFAVRDMR T AVGV
Sbjct:  255 KIGGIGTVPVGRVETGIIKPGMVVSFAPSNVTTEVKSVEMHHEQLAEGLPGDNVGFNVKNVSVKDIRRGDVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFSELIEKIDRRTGKTMEAAPKFVKSGDAAIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGV 437
The following BLAST results are available for this feature:
BLAST of FC876345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
EF1A1_RABIT2.215e-7878.14Elongation factor 1-alpha 1 OS=Oryctolagus cunicul... [more]
EF1A1_PONAB2.215e-7878.14Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF... [more]
EF1A1_PANTR2.215e-7878.14Elongation factor 1-alpha 1 OS=Pan troglodytes GN=... [more]
EF1A1_MOUSE2.215e-7878.14Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef... [more]
EF1A1_HUMAN2.215e-7878.14Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF... [more]
EF1A1_FELCA2.215e-7878.14Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1... [more]
EF1A1_CRIGR2.215e-7878.14Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN2.215e-7878.14Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A0_XENLA2.215e-7877.60Elongation factor 1-alpha, somatic form OS=Xenopus... [more]
EF1A_PIRIN3.779e-7873.77Elongation factor 1-alpha OS=Piriformospora indica... [more]

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Properties
Property NameValue
Genbank descriptionC32003F10EF DevOvary1 Citrus clementina cDNA clone C32003F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876345 ID=FC876345; Name=FC876345; organism=Citrus clementina; type=EST; length=551bp
AAGATTGGTGGCATTGGAACCGCCCCAGTGGGTCGCGTTGAGACCGGTGT
CCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACAACTG
AGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCG
GGTGACAATGTTGGTTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAA
GCGTGGTTTTGTTGCTTCCAACTCGAAGGATGATCCGGCCAGGGAAGCTG
CCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGATTGGA
AATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCCGATTGCCCTCAA
GTTTTCTGAGCTCGTGACGAAGATTGATAGGCGATCAGGCAAGGAGCTTG
AGAAGGAGCCCAAGTTCTTGAAGAATGGAGACGCCGGAATGGTTAAGATG
ATTCCCACCAAGCCCATGGTTGTTGATACCTTCTCCGATTACCCACCCCT
TGGTCGTTTTGCTGTTAGGGACATGCGTCACACTGCTGCTGTGGGTGTTA
T
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