FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.173e-25
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            M ++     S  +F + D+S +DFGR EI++AE EMPGLMA R ++   +P KG KI GSLHMTIQTAVLIETL  LGAEV+W SCNIFSTQ
Sbjct:    1 MVIANSVKTSTPKFIISDISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAEVKWASCNIFSTQ 92          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.173e-25
Identity = 56/78 (71.79%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  169 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            KV DLS AD+GR EI +AE EMPGLMA R ++   +P  G +I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:   18 KVADLSLADWGRKEIAIAETEMPGLMALREQYADKKPLAGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQ 95          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BURP8 (Adenosylhomocysteinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.173e-25
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            M  +V  S   ++F V DLS AD+GR E+++AE EMPGL+  R E+   QP KG ++ GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQ
Sbjct:    1 MNAAVIDSKHSQDFIVADLSLADWGRKELDIAETEMPGLVQIREEYKAQQPLKGARVAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQ 92          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFA (Adenosylhomocysteinase OS=Xylella fastidiosa GN=ahcY PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 4.144e-25
Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +++    +K+ D+S  D+GR EI++AE EMPGLM+ R ++   QP KGV++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQ
Sbjct:    6 QTSPNTHYKIADISLTDWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RALEH (Adenosylhomocysteinase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.144e-25
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +++ V D++ A +GR EI +AE EMPGLMA R EF  +QP KG +I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    9 QDYLVADINLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQ 89          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.144e-25
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            M ++    +S   + V D+S +DFGR EI++AE EMPGLMA R ++   +P KG KI GSLHMTIQTAVLIETL  LGAEV+W SCNIFSTQ
Sbjct:    1 MVIANSVKSSTTNYVVADISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAEVKWASCNIFSTQ 92          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PROM4 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.144e-25
Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 1
Query:  124 AMALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A + S Q+  +  E+++ D+  A+FGR E+ +AE EMPGLMA R ++   +P KG +I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    3 AASASTQQLHNHIEYEIADIELAEFGRKELAIAEKEMPGLMALREKYHKEKPLKGARIAGSLHMTIQTAVLIETLVALGAQVRWASCNIFSTQ 95          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.144e-25
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +++ V D++ A +GR EI +AE EMPGLMA R EF  +QP KG +I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    9 QDYLVADINLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQ 89          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 1
Query:  124 AMALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A+  S+    +  ++ V D+  ADFGR E+ +AE EMPGLMA R + G  +P KG +I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQ
Sbjct:    3 AVPTSMASLQAPPQYVVADIDLADFGRKELSIAETEMPGLMALRVKHGSEKPLKGARIAGSLHMTIQTGVLIETLVALGADVRWASCNIFSTQ 95          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PROM2 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25
Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            M +S     S   F + D+S +DFGR EI++AE EMPGLMA R ++   +P KG KI GSLHMTIQTAVLIETL  LGA+V+W SCNIFSTQ
Sbjct:    1 MVISNSIKTSVPHFVISDISLSDFGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAQVKWASCNIFSTQ 92          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_PROM03.173e-2560.87Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_NITEU3.173e-2571.79Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHH_BURP83.173e-2560.87Adenosylhomocysteinase OS=Burkholderia phymatum (s... [more]
SAHH_XYLFA4.144e-2560.47Adenosylhomocysteinase OS=Xylella fastidiosa GN=ah... [more]
SAHH_RALEH4.144e-2567.90Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_PROM94.144e-2560.87Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM44.144e-2559.14Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_CUPTR4.144e-2567.90Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]
SAHH_PROM35.413e-2559.14Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM25.413e-2560.87Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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