FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PELPB (Adenosylhomocysteinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25
Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++KV DLS A++GR EI++AE EMPGLMA R ++    P KG +I GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    9 DYKVADLSLAEWGRKEIDVAEKEMPGLMATRRKYAGQYPLKGARIAGSLHMTIQTAVLIETLVELGAEVRWASCNIFSTQ 88          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_DESDG (Adenosylhomocysteinase OS=Desulfovibrio desulfuricans (strain G20) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            E KVKDLSQADFG  E++L+E EMPGLM   A+ G  +P KG+K+TGSLHMTIQTA+LI+TL  LGA++RW SCNIFSTQ
Sbjct:   15 ENKVKDLSQADFGYKEMQLSEREMPGLMELIAKHGAEKPLKGLKVTGSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQ 94          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_DELAS (Adenosylhomocysteinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + D+S A +GR EI +AE EMPGLMA R EF  +QP KG +I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:   14 IADISLAAWGRKEILIAETEMPGLMATREEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGAEVRWASCNIFSTQ 90          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.069e-25
Identity = 55/77 (71.43%), Postives = 63/77 (81.82%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            V+D+S A +GR EI++AE EMPGLMA R E+   +P KG +ITGSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    8 VRDISLAGWGRKEIDIAEGEMPGLMALREEYAAKKPLKGARITGSLHMTIQTAVLIETLVDLGAEVRWASCNIFSTQ 84          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.069e-25
Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +++ V D+  A +GR EI +AE EMPGLMA R EF  +QP KG +I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    9 QDYIVADIGLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQ 89          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.069e-25
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 1
Query:  130 ALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A S  +     +F V D++ ADFGR E+ +AE EMPGLM+ R ++G  +P +G +I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQ
Sbjct:    5 AASTSQVVGDSDFVVADITLADFGRKELAIAEKEMPGLMSLRDKYGQEKPLQGARIAGSLHMTIQTGVLIETLVALGAQVRWASCNIFSTQ 95          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PLAYO (Adenosylhomocysteinase OS=Plasmodium yoelii yoelii GN=PY02893 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.069e-25
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 1
Query:  169 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 399
            K+KDLS A FG+L++E++E EMPG+M  R E+   +PFKG KITG LHMTI+TA+LIETL  LGA +RWCSCNIFST
Sbjct:    7 KIKDLSLAPFGKLQMEISETEMPGIMTIREEYEKLKPFKGAKITGCLHMTIETALLIETLQKLGARIRWCSCNIFST 83          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.233e-25
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 1
Query:  157 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            G +  + D++ A FGR E+++AE EMPGLMA RA++G  +P KG +I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQ
Sbjct:   14 GTDCVIADINLAAFGRKELDIAETEMPGLMALRAKYGNEKPLKGARIAGSLHMTIQTAVLIETLEELGADVRWASCNIFSTQ 95          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.233e-25
Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 1
Query:  157 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            G +  + D++QA FGR E+++AE EMPGLMA R ++G  +P KG +I GSLHMTIQTA LIETL  LGAEVRW SCNIFSTQ
Sbjct:   14 GVDCVIADINQAAFGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQ 95          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_SOLUE (Adenosylhomocysteinase OS=Solibacter usitatus (strain Ellin6076) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.233e-25
Identity = 56/83 (67.47%), Postives = 64/83 (77.11%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            S   FKV DLS A++GR EI ++E EMPGLMA R ++   +P  GV+ITGSLHMTIQTAVLIETL  LGA VRW SCNIFSTQ
Sbjct:    9 SDATFKVADLSLAEWGRKEISVSEFEMPGLMAIRRKYAKEKPLAGVRITGSLHMTIQTAVLIETLVDLGASVRWASCNIFSTQ 91          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_PELPB5.413e-2568.75Adenosylhomocysteinase OS=Pelodictyon phaeoclathra... [more]
SAHH_DESDG5.413e-2568.75Adenosylhomocysteinase OS=Desulfovibrio desulfuric... [more]
SAHH_DELAS5.413e-2572.73Adenosylhomocysteinase OS=Delftia acidovorans (str... [more]
SAHH_ZYMMO7.069e-2571.43Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]
SAHH_RALME7.069e-2567.90Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]
SAHH_PROMA7.069e-2559.34Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PLAYO7.069e-2566.23Adenosylhomocysteinase OS=Plasmodium yoelii yoelii... [more]
SAHH_SYNS99.233e-2564.63Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNPX9.233e-2564.63Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SOLUE9.233e-2567.47Adenosylhomocysteinase OS=Solibacter usitatus (str... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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