FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PROVI (Adenosylhomocysteinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.582e-24
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +A+  ++KV D+S A++GR EI++AE EMPGLMA R ++   +P  G +I+GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQ
Sbjct:    4 AATALDYKVADISLAEWGRKEIDIAEKEMPGLMAIRNKYKGQKPLAGSRISGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQ 88          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_HERAR (Adenosylhomocysteinase OS=Herminiimonas arsenicoxydans GN=ahcY PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.582e-24
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 1
Query:  130 ALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A  +  S +  ++ + DLS + +G  EI +AE EMPGLMA R EF  +QP KG +ITGS+HMTIQTAVLI+TL ALGA+VRW SCNI+STQ
Sbjct:    3 AAVMTSSTNFSDYVIADLSLSVWGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAVLIQTLEALGAKVRWASCNIYSTQ 93          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHHB_XENLA (Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy-B PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.582e-24
Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D+S AD+GR  IE+AE EMPGLM  R  +  S+P KG +I G LHMT+QTAVLIETLTA+GAEV+W SCNIFSTQ
Sbjct:    7 YKVADISLADWGRKAIEIAENEMPGLMKMREMYSESKPLKGARIAGCLHMTLQTAVLIETLTAIGAEVQWSSCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU5 (Adenosylhomocysteinase OS=Pseudomonas stutzeri (strain A1501) GN=ahcY PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.984e-24
Identity = 56/89 (62.92%), Postives = 64/89 (71.91%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +V   A   +FKV D+S A +GR EI +AE EMP LM  R ++   QP KG KI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    3 AVMTPAGFTDFKVADISLAAWGRREIIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLIALGAEVRWSSCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_JANMA (Adenosylhomocysteinase OS=Janthinobacterium sp. (strain Marseille) GN=ahcY PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.984e-24
Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++ + DLS + +G  EI +AE EMPGLMA R EF  +QP KG +ITGS+HMTIQTAVLI+TL ALGA+VRW SCNI+STQ
Sbjct:   14 DYVIADLSLSAWGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAVLIQTLEALGAKVRWASCNIYSTQ 93          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   + P K V+ITGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQ
Sbjct:    3 AVTKITPHADYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTTPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   + P K V+ITGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQ
Sbjct:    3 AVTKITPHADYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTTPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BURTA (Adenosylhomocysteinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            M  +V  S S +++ V D++ A +GR E+ +AE EMPGL+  R E+   QP KG +I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQ
Sbjct:    1 MNAAVIDSNSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQ 92          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BURPS (Adenosylhomocysteinase OS=Burkholderia pseudomallei GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            M  +V  S S +++ V D++ A +GR E+ +AE EMPGL+  R E+   QP KG +I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQ
Sbjct:    1 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQ 92          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BURP6 (Adenosylhomocysteinase OS=Burkholderia pseudomallei (strain 668) GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  127 MALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            M  +V  S S +++ V D++ A +GR E+ +AE EMPGL+  R E+   QP KG +I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQ
Sbjct:    1 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQ 92          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_PROVI4.582e-2462.35Adenosylhomocysteinase OS=Prosthecochloris vibriof... [more]
SAHH_HERAR4.582e-2459.34Adenosylhomocysteinase OS=Herminiimonas arsenicoxy... [more]
SAHHB_XENLA4.582e-2467.09Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy... [more]
SAHH_PSEU55.984e-2462.92Adenosylhomocysteinase OS=Pseudomonas stutzeri (st... [more]
SAHH_JANMA5.984e-2465.00Adenosylhomocysteinase OS=Janthinobacterium sp. (s... [more]
SAHH_XANOP7.816e-2459.55Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM7.816e-2459.55Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_BURTA7.816e-2458.70Adenosylhomocysteinase OS=Burkholderia thailandens... [more]
SAHH_BURPS7.816e-2458.70Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURP67.816e-2458.70Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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