FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..406. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.731e-29
Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 1 
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++ VKD+S ADFGR EI +AE EMPGLMA RAE+GP Q  KG +I GSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQ
Sbjct:    3 DYIVKDISLADFGRKEIAIAETEMPGLMATRAEYGPQQILKGARIAGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQ 82
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 1 
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +++ V D+  ADFGR EI +AE EMPGLM+CR EFG ++P KG +ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRTEFGQAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 1 
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +++ V D+  ADFGR EI +AE EMPGLM+CR EFG ++P KG +ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRTEFGQTKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSU (Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSI (Adenosylhomocysteinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUO2 (Adenosylhomocysteinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUME (Adenosylhomocysteinase OS=Brucella melitensis GN=ahcY PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRRELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUMB (Adenosylhomocysteinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRRELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUC2 (Adenosylhomocysteinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85
[Close]
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRUAB (Adenosylhomocysteinase OS=Brucella abortus GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.069e-29
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KG +I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQ
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQ 85
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_CAUCR4.731e-2977.50Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_RHILW8.069e-2972.84Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_RHIL38.069e-2972.84Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_BRUSU8.069e-2972.29Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE... [more]
SAHH_BRUSI8.069e-2972.29Adenosylhomocysteinase OS=Brucella suis (strain AT... [more]
SAHH_BRUO28.069e-2972.29Adenosylhomocysteinase OS=Brucella ovis (strain AT... [more]
SAHH_BRUME8.069e-2972.29Adenosylhomocysteinase OS=Brucella melitensis GN=a... [more]
SAHH_BRUMB8.069e-2972.29Adenosylhomocysteinase OS=Brucella melitensis biot... [more]
SAHH_BRUC28.069e-2972.29Adenosylhomocysteinase OS=Brucella canis (strain A... [more]
SAHH_BRUAB8.069e-2972.29Adenosylhomocysteinase OS=Brucella abortus GN=ahcY... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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