FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.474e-22
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +V   A   ++KV D++ A +GR E+ +AE EMP LM  R ++   QP KG KI G +HMTIQT VLIETL ALGAEVRW SCNIFSTQ
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 1.474e-22
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D+S A +GR  ++LAE EMPGLM  R  +  S+P KG +I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    7 YKVADISLAAWGRKALDLAENEMPGLMHMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPG (Adenosylhomocysteinase OS=Pseudomonas putida (strain GB-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.514e-22
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++KV D+S A +GR E  +AE EMP LM  R ++   QP KG KI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:   12 DYKVADISLAAWGRRETIIAESEMPALMGLRRKYLTEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_PSEP1 (Adenosylhomocysteinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.514e-22
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++KV D+S A +GR E  +AE EMP LM  R ++   QP KG KI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:   12 DYKVADISLAAWGRRETIIAESEMPALMGLRRKYLAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BDEBA (Adenosylhomocysteinase OS=Bdellovibrio bacteriovorus GN=ahcY PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.289e-22
Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 1
Query:  190 ADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A +GR EI++AE EMPGLMA R E+   QP KG +I G LHMTIQTAVLIETL  LGAE+RW SCNIFSTQ
Sbjct:   41 AKWGREEIKIAETEMPGLMALRKEYKKQQPLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQ 111          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KG +I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KG +I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22
Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D+  A +GR  +++AE EMPGLM  R ++  S+P KG +I G LHMT++TAVLIETL ALGAEV+W SCNIFSTQ
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREQYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVQWSSCNIFSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22
Identity = 48/78 (61.54%), Postives = 63/78 (80.77%), Query Frame = 1
Query:  169 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            KV D++ ADFG  E++L+E E+PGLM     +G S+P KG+++TGSLHMTIQTA+LI+TL  LGA++RW SCNIFSTQ
Sbjct:   17 KVADMALADFGHKEMQLSEREVPGLMELIRMYGVSKPLKGLRVTGSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQ 94          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_HUMAN (Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=1 SV=4)

HSP 1 Score: 100.523 bits (249), Expect = 2.780e-21
Identity = 47/79 (59.49%), Postives = 59/79 (74.68%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KG +I G LHMT++TAVLIETL  LGAEV+W SCNIFSTQ
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFSTQ 85          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_PSEA81.474e-2258.43Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_BOVIN1.474e-2264.56Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHH_PSEPG2.514e-2265.00Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_PSEP12.514e-2265.00Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_BDEBA4.289e-2270.42Adenosylhomocysteinase OS=Bdellovibrio bacteriovor... [more]
SAHH_RAT5.601e-2262.03Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHH_MOUSE5.601e-2262.03Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_MACFA5.601e-2260.76Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_DESVM5.601e-2261.54Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_HUMAN2.780e-2159.49Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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