FC876351

Overview
NameFC876351
Unique NameFC876351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length404
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.230e-28
Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++ V D+S A +GR EIE+AE EMPGLMACR EFG ++P KG +ITGSLHMTIQTAVLIETL +LGAEVRW SCNIFSTQ
Sbjct:    5 DYVVADMSLAAWGRKEIEIAETEMPGLMACREEFGEAKPLKGARITGSLHMTIQTAVLIETLKSLGAEVRWASCNIFSTQ 84          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.230e-28
Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++ VKD+S A+FGR EI LAE EMPGLMA R E+GP QP KG +I GSLHMTIQTAVLIETL ALGA++RW SCNI+STQ
Sbjct:    9 DYIVKDISLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQ 88          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.831e-28
Identity = 60/83 (72.29%), Postives = 69/83 (83.13%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +G EFKV DLS AD+GR +IEL+E EMPGLM+ R E+   QP KG +I+GSLHMT+QTAVLIETL ALGAEVRW SCNIFSTQ
Sbjct:   14 NGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQ 96          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_CAEEL (Adenosylhomocysteinase OS=Caenorhabditis elegans GN=ahcy-1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.831e-28
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +KV D+  ADFGR EI LAE EMPGLMA R+++GPSQP KG +I G LHMTIQTAVLIETLTALGAEV+W SCNIFSTQ
Sbjct:    8 YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIETLTALGAEVQWSSCNIFSTQ 86          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.922e-28
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KG +I GSLHMTIQTAVLIETL ALGA+VRW SCNI+STQ
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYSTQ 86          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_LEIDO (Adenosylhomocysteinase OS=Leishmania donovani PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.922e-28
Identity = 59/80 (73.75%), Postives = 67/80 (83.75%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            ++KVKD+S A++GR  IELAE EMPGLM  R E+GPSQP KG KI G LHMT+QTAVLIETL ALGA+VRW SCNIFSTQ
Sbjct:    3 DYKVKDISLAEWGRKAIELAENEMPGLMELRREYGPSQPLKGAKIAGCLHMTVQTAVLIETLKALGADVRWSSCNIFSTQ 82          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.165e-27
Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            +V K     +  V DLS AD+GR EI++AE EMPGLMA R EF  SQP KG +ITGSLHMTIQTAVL+ETL ALGA+VRW SCNIFSTQ
Sbjct:    3 AVLKPTPTHDHHVADLSLADWGRKEIKIAETEMPGLMAIRQEFAASQPLKGARITGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQ 91          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.165e-27
Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KG KI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQ
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.165e-27
Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KG KI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQ
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQ 85          
BLAST of FC876351 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.165e-27
Identity = 57/84 (67.86%), Postives = 70/84 (83.33%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGVKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 402
            A+ + + VKD+S A +GR+E ++AE+EMPGLMA R E+  SQP KG +I GSLHMT+QTA+LIETLTALGAEVRW SCNIFSTQ
Sbjct:    5 AADKPYIVKDMSLAKWGRIEFDMAEIEMPGLMALREEYKDSQPLKGARIAGSLHMTVQTAILIETLTALGAEVRWASCNIFSTQ 88          
The following BLAST results are available for this feature:
BLAST of FC876351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
SAHH_MESSB5.230e-2873.75Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_BRASB5.230e-2872.50Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_MYCPA6.831e-2872.29Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_CAEEL6.831e-2875.95Adenosylhomocysteinase OS=Caenorhabditis elegans G... [more]
SAHH_RHOP28.922e-2869.41Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_LEIDO8.922e-2873.75Adenosylhomocysteinase OS=Leishmania donovani PE=3... [more]
SAHH_METPP1.165e-2768.54Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_METEP1.165e-2769.05Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC41.165e-2769.05Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_MARMM1.165e-2767.86Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]

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Properties
Property NameValue
Genbank descriptionC32003G05EF DevOvary1 Citrus clementina cDNA clone C32003G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876351 ID=FC876351; Name=FC876351; organism=Citrus clementina; type=EST; length=404bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGTCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGA
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